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Welcome to the Goldman Lab genomics database
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Marker Genes
Adult WMPC enriched genes (10%FDR) - U95Av2
Adult WMPC depleted genes (10%FDR) - U95Av2
Enriched in Neurocytoma vs Adult VZ (2-sample, t-test 10% FDR) from 3P
Enriched in Neurocytoma vs Nestin-sorted VZ (n=2, 2-sample, t-test 10% FDR) from 3P
Fetal VZ SOX2+ enriched vs. SOX2- and tissue (>4 fold, 5% FDR)
Fetal VZ SOX2+ depleted vs. SOX2- and tissue (>4 fold, 5% FDR)
Fetal PDGFRA/CD140a specific transcripts
A2B5+ glioma vs A2B5+ non-tumor, differentially enriched genes
A2B5+ glioma vs A2B5+ non-tumor, differentially depleted genes
A2B5+ low-grade tumor vs A2B5+ non-tumor, differentially depleted genes
A2B5+ low-grade tumor vs A2B5+ non-tumor, differentially enriched genes
A2B5+ high-grade tumor vs A2B5+ low-grade tumor, differentially enriched genes
A2B5+ high-grade tumor vs A2B5+ low-grade tumor, differentially depleted genes
A2B5+ oligodendroglioma vs A2B5+ non-tumor, differentially enriched genes
A2B5+ oligodendroglioma vs A2B5+ non-tumor, differentially depleted genes
A2B5+ astrocytoma vs A2B5+ non-tumor, differentially enriched genes
A2B5+ astrocytoma vs A2B5+ non-tumor, differentially depleted genes
A2B5+ low-grade astrocytoma vs A2B5+ oligodendroglioma, differentially enriched genes
A2B5+ low-grade astrocytoma vs A2B5+ oligodendroglioma, differentially depleted genes
Select GO Term
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All Genes
anatomical structure development
Angiogenesis
BMP signaling
catalytic activity
Cell adhesion
Cell cycle
Cell differentiation
Cell growth and/or maintenance
cell migration
ER to Golgi transport
Extracellular Matrix
Extracellular matrix - Cellular component
Extracellular region - Cellular component
Extracellular space - Cellular component
Glycolysis
GPCRs
Immune response
insulin receptor binding
insulin-like growth factor receptor binding
Integral to membrane
integrin complex
Intracellular - Cellular component
Ligands (receptor binding)
multicellular organismal development
multicellular organismal process
Myelination
Negative regulation of cell cycle progression
Negative regulation of cell proliferation
Nervous system development
N-formylglutamate deformylase activity
Notch signaling pathway
Positive regulation of cell proliferation
Positive regulation of neurogenesis
programmed cell death
Protein refolding (Heat Shock Proteins)
Protein tyrosine phosphatase activity
Receptors
regulation of transcription, DNA-dependent
Sterol metabolism
system development
TGF-beta signaling
Transcription Factors
WNT signaling
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(proliferation OR "cell cycle")
leukocyte
migration
myelin
neurogenesis
oligodendrocyte
progenitor
tumor
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