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Eric J. Wagner, Ph.D.

Publications

Showing all 85 journal articles & 0 books available

Journal Articles

8/30/2023
Haugen RJ, Barnier C, Elrod ND, Luo H, Jensen MK, Ji P, Smibert CA, Lipshitz HD, Wagner EJ, Freddolino PL, Goldstrohm AC. "Regulation of the Drosophila transcriptome by Pumilio and CCR4-NOT deadenylase." bioRxiv : the preprint server for biology.. 2023 Aug 30; Epub 2023 Aug 30.

6/30/2023
Jonnakuti VS, Ji P, Gao Y, Lin A, Chu Y, Elrod N, Huang KL, Li W, Yalamanchili HK, Wagner EJ. "NUDT21 alters glioma migration through differential alternative polyadenylation of LAMC1." Journal of neuro-oncology.. 2023 Jun 30; Epub 2023 Jun 30.

4/4/2023
Tepe B, Macke EL, Niceta M, Weisz Hubshman M, Kanca O, Schultz-Rogers L, Zarate YA, Schaefer GB, Granadillo De Luque JL, Wegner DJ, Cogne B, Gilbert-Dussardier B, Le Guillou X, Wagner EJ, Pais LS, Neil JE, Mochida GH, Walsh CA, Magal N, Drasinover V, Shohat M, Schwab T, Schmitz C, Clark K, Fine A, Lanpher B, Gavrilova R, Blanc P, Burglen L, Afenjar A, Steel D, Kurian MA, Prabhakar P, Gößwein S, Di Donato N, Bertini ES, , Wangler MF, Yamamoto S, Tartaglia M, Klee EW, Bellen HJ. "Bi-allelic variants in INTS11 are associated with a complex neurological disorder." American journal of human genetics.. 2023 Apr 4; Epub 2023 Apr 04.

2/17/2023
de Prisco N, Ford C, Elrod ND, Lee W, Tang LC, Huang KL, Lin A, Ji P, Jonnakuti VS, Boyle L, Cabaj M, Botta S, Õunap K, Reinson K, Wojcik MH, Rosenfeld JA, Bi W, Tveten K, Prescott T, Gerstner T, Schroeder A, Fong CT, George-Abraham JK, Buchanan CA, Hanson-Khan A, Bernstein JA, Nella AA, Chung WK, Brandt V, Jovanovic M, Targoff KL, Yalamanchili HK, Wagner EJ, Gennarino VA. "Alternative polyadenylation alters protein dosage by switching between intronic and 3'UTR sites." Science advances.. 2023 Feb 17; 9(7):eade4814. Epub 2023 Feb 17.

2/3/2023
Cui Y, Arnold FJ, Peng F, Wang D, Li JS, Michels S, Wagner EJ, La Spada AR, Li W. "Alternative polyadenylation transcriptome-wide association study identifies APA-linked susceptibility genes in brain disorders." Nature communications.. 2023 Feb 3; 14(1):583. Epub 2023 Feb 03.

1/24/2023
Jonnakuti VS, Wagner EJ, Maleti?-Savati? M, Liu Z, Yalamanchili HK. "PolyAMiner-Bulk: A Machine Learning Based Bioinformatics Algorithm to Infer and Decode Alternative Polyadenylation Dynamics from bulk RNA-seq data." bioRxiv : the preprint server for biology.. 2023 Jan 24; Epub 2023 Jan 24.

1/14/2023
Liu S, Baeg GH, Yang Y, Goh FG, Bao H, Wagner EJ, Yang X, Cai Y. "The Integrator complex desensitizes cellular response to TGF-?/BMP signaling." Cell reports.. 2023 Jan 14; 42(1):112007. Epub 2023 Jan 14.

1/4/2023
Wagner EJ, Tong L, Adelman K. "Integrator is a global promoter-proximal termination complex." Molecular cell.. 2023 Jan 4; Epub 2023 Jan 04.

10/28/2022
Stein CB, Field AR, Mimoso CA, Zhao C, Huang KL, Wagner EJ, Adelman K. "Integrator endonuclease drives promoter-proximal termination at all RNA polymerase II-transcribed loci." Molecular cell.. 2022 Oct 28; Epub 2022 Oct 28.

10/13/2022
Mascibroda LG, Shboul M, Elrod ND, Colleaux L, Hamamy H, Huang KL, Peart N, Singh MK, Lee H, Merriman B, Jodoin JN, Sitaram P, Lee LA, Fathalla R, Al-Rawashdeh B, Ababneh O, El-Khateeb M, Escande-Beillard N, Nelson SF, Wu Y, Tong L, Kenney LJ, Roy S, Russell WK, Amiel J, Reversade B, Wagner EJ. "INTS13 variants causing a recessive developmental ciliopathy disrupt assembly of the Integrator complex." Nature communications.. 2022 Oct 13; 13(1):6054. Epub 2022 Oct 13.

9/30/2022
Lin MH, Jensen MK, Elrod ND, Huang KL, Welle KA, Wagner EJ, Tong L. "Inositol hexakisphosphate is required for Integrator function." Nature communications.. 2022 Sep 30; 13(1):5742. Epub 2022 Sep 30.

6/4/2022
Tseng V, Collum S, Allawzi A, Crotty K, Yeligar S, Trammell A, Ryan Smith M, Kang BY, Sutliff RL, Ingram JL, Jyothula SS, Thandavarayan RA, Huang HJ, Nozik ES, Wagner EJ, Michael Hart C, Karmouty-Quintana H. "3'UTR shortening of HAS2 promotes hyaluronan hyper-synthesis and bioenergetic dysfunction in pulmonary hypertension." Matrix biology : journal of the International Society for Matrix Biology.. 2022 Jun 4; Epub 2022 Jun 04.

4/14/2022
Wilson C, Mertens TC, Shivshankar P, Bi W, Collum SD, Wareing N, Ko J, Weng T, Naikawadi RP, Wolters PJ, Maire P, Jyothula SS, Thandavarayan RA, Ren D, Elrod ND, Wagner EJ, Huang HJ, Dickey BF, Ford HL, Karmouty-Quintana H. "Sine oculis homeobox homolog 1 (Six1) plays a critical role in pulmonary fibrosis." JCI insight.. 2022 Apr 14; Epub 2022 Apr 14.

2/4/2022
LaForce GR, Farr JS, Liu J, Akesson C, Gumus E, Pinkard O, Miranda HC, Johnson K, Sweet TJ, Ji P, Lin A, Coller J, Philippidou P, Wagner EJ, Schaffer AE. "Suppression of premature transcription termination leads to reduced mRNA isoform diversity and neurodegeneration." Neuron.. 2022 Feb 4; Epub 2022 Feb 04.

11/2/2021
Cao J, Verma SK, Jaworski E, Mohan S, Nagasawa CK, Rayavara K, Sooter A, Miller SN, Holcomb RJ, Powell MJ, Ji P, Elrod ND, Yildirim E, Wagner EJ, Popov V, Garg NJ, Routh AL, Kuyumcu-Martinez MN. "RBFOX2 is critical for maintaining alternative polyadenylation patterns and mitochondrial health in rat myoblasts." Cell reports.. 2021 Nov 2; 37(5):109910.

10/4/2021
Lin A, Ji P, Niu X, Zhao X, Chen Y, Liu W, Liu Y, Fan W, Sun Y, Miao C, Zhang S, Tan W, Lin D, Wagner EJ, Wu C. "CstF64-induced shortening of the BID 3'UTR promotes esophageal squamous cell carcinoma progression by disrupting ceRNA crosstalk with ZFP36L2." Cancer research.. 2021 Oct 4; Epub 2021 Oct 04.

7/2021
Li L, Huang KL, Gao Y, Cui Y, Wang G, Elrod ND, Li Y, Chen YE, Ji P, Peng F, Russell WK, Wagner EJ, Li W. "An atlas of alternative polyadenylation quantitative trait loci contributing to complex trait and disease heritability." Nature genetics.. 2021 Jul; 53(7):994-1005. Epub 2021 May 13.

4/2021
Enwerem III, Elrod ND, Chang CT, Lin A, Ji P, Bohn JA, Levdansky Y, Wagner EJ, Valkov E, Goldstrohm AC. "Human Pumilio proteins directly bind the CCR4-NOT deadenylase complex to regulate the transcriptome." RNA.. 2021 Apr; 27(4):445-464. Epub 2021 Jan 04.

1/2021
Yuan F, Hankey W, Wagner EJ, Li W, Wang Q. "Alternative polyadenylation of mRNA and its role in cancer." Genes & diseases.. 2021 Jan; 8(1):61-72. Epub 2019 Oct 25.

2021
Jensen MK, Elrod ND, Yalamanchili HK, Ji P, Lin A, Liu Z, Wagner EJ. "Application and design considerations for 3'-end sequencing using click-chemistry." Methods in enzymology.. 2021 655:1-23. Epub 2021 May 04.

2021
Yalamanchili HK, Elrod ND, Jensen MK, Ji P, Lin A, Wagner EJ, Liu Z. "A computational pipeline to infer alternative poly-adenylation from 3' sequencing data." Methods in enzymology.. 2021 655:185-204. Epub 2021 Jun 05.

10/15/2020
Huang KL, Jee D, Stein CB, Elrod ND, Henriques T, Mascibroda LG, Baillat D, Russell WK, Adelman K, Wagner EJ. "Integrator Recruits Protein Phosphatase 2A to Prevent Pause Release and Facilitate Transcription Termination." Molecular cell.. 2020 Oct 15; 80(2):345-358.e9. Epub 2020 Sep 22.

7/9/2020
Yalamanchili HK, Alcott CE, Ji P, Wagner EJ, Zoghbi HY, Liu Z. "PolyA-miner: accurate assessment of differential alternative poly-adenylation from 3'Seq data using vector projections and non-negative matrix factorization." Nucleic acids research.. 2020 Jul 9; 48(12):e69.

4/22/2020
Alcott CE, Yalamanchili HK, Ji P, van der Heijden ME, Saltzman A, Elrod N, Lin A, Leng M, Bhatt B, Hao S, Wang Q, Saliba A, Tang J, Malovannaya A, Wagner EJ, Liu Z, Zoghbi HY. "Partial loss of CFIm25 causes learning deficits and aberrant neuronal alternative polyadenylation." eLife.. 2020 Apr 22; 9Epub 2020 Apr 22.

2/3/2020
Weng T, Huang J, Wagner EJ, Ko J, Wu M, Wareing NE, Xiang Y, Chen NY, Ji P, Molina JG, Volcik KA, Han L, Mayes MD, Blackburn MR, Assassi S. "Downregulation of CFIm25 amplifies dermal fibrosis through alternative polyadenylation." The Journal of experimental medicine.. 2020 Feb 3; 217(2)

12/5/2019
Elrod ND, Henriques T, Huang KL, Tatomer DC, Wilusz JE, Wagner EJ, Adelman K. "The Integrator Complex Attenuates Promoter-Proximal Transcription at Protein-Coding Genes." Molecular cell.. 2019 Dec 5; 76(5):738-752.e7.

11/1/2019
Tatomer DC, Elrod ND, Liang D, Xiao MS, Jiang JZ, Jonathan M, Huang KL, Wagner EJ, Cherry S, Wilusz JE. "The Integrator complex cleaves nascent mRNAs to attenuate transcription." Genes & development.. 2019 Nov 1; 33(21-22):1525-1538. Epub 2019 Sep 17.

10/2019
Yoshimi A, Lin KT, Wiseman DH, Rahman MA, Pastore A, Wang B, Lee SC, Micol JB, Zhang XJ, de Botton S, Penard-Lacronique V, Stein EM, Cho H, Miles RE, Inoue D, Albrecht TR, Somervaille TCP, Batta K, Amaral F, Simeoni F, Wilks DP, Cargo C, Intlekofer AM, Levine RL, Dvinge H, Bradley RK, Wagner EJ, Krainer AR, Abdel-Wahab O. "Coordinated alterations in RNA splicing and epigenetic regulation drive leukaemogenesis." Nature.. 2019 Oct; 574(7777):273-277. Epub 2019 Oct 02.

5/1/2019
Weng T, Ko J, Masamha CP, Xia Z, Xiang Y, Chen NY, Molina JG, Collum S, Mertens TC, Luo F, Philip K, Davies J, Huang J, Wilson C, Thandavarayan RA, Bruckner BA, Jyothula SS, Volcik KA, Li L, Han L, Li W, Assassi S, Karmouty-Quintana H, Wagner EJ, Blackburn MR. "Cleavage factor 25 deregulation contributes to pulmonary fibrosis through alternative polyadenylation." The Journal of clinical investigation.. 2019 May 1; 129(5):1984-1999. Epub 2019 Feb 28.

5/2019
Chu Y, Elrod N, Wang C, Li L, Chen T, Routh A, Xia Z, Li W, Wagner EJ, Ji P. "Nudt21 regulates the alternative polyadenylation of Pak1 and is predictive in the prognosis of glioblastoma patients." Oncogene.. 2019 May; 38(21):4154-4168. Epub 2019 Jan 31.

2/15/2019
Elrod ND, Jaworski EA, Ji P, Wagner EJ, Routh A. "Development of Poly(A)-ClickSeq as a tool enabling simultaneous genome-wide poly(A)-site identification and differential expression analysis." Methods : a companion to Methods in enzymology.. 2019 Feb 15; 155:20-29. Epub 2019 Jan 06.

2/15/2019
Wagner EJ, Goldstrohm AC. "Biochemical and Next Generation Sequencing Approaches to Study RNA Regulation." Methods : a companion to Methods in enzymology.. 2019 Feb 15; 155:1-2.

2/7/2019
Matera AG, Raimer AC, Schmidt CA, Kelly JA, Droby GN, Baillat D, Ten Have S, Lamond AI, Wagner EJ, Gray KM. "Composition of the Survival Motor Neuron (SMN) Complex in ." G3 : genes - genomes - genetics.. 2019 Feb 7; 9(2):491-503. Epub 2019 Feb 07.

6/2018
Park HJ, Ji P, Kim S, Xia Z, Rodriguez B, Li L, Su J, Chen K, Masamha CP, Baillat D, Fontes-Garfias CR, Shyu AB, Neilson JR, Wagner EJ, Li W. "3' UTR shortening represses tumor-suppressor genes in trans by disrupting ceRNA crosstalk." Nature genetics.. 2018 Jun; 50(6):783-789. Epub 2018 May 21.

5/4/2018
Albrecht TR, Shevtsov SP, Wu Y, Mascibroda LG, Peart NJ, Huang KL, Sawyer IA, Tong L, Dundr M, Wagner EJ. "Integrator subunit 4 is a 'Symplekin-like' scaffold that associates with INTS9/11 to form the Integrator cleavage module." Nucleic acids research.. 2018 May 4; 46(8):4241-4255.

1/15/2018
Gray KM, Kaifer KA, Baillat D, Wen Y, Bonacci TR, Ebert AD, Raimer AC, Spring AM, Have ST, Glascock JJ, Gupta K, Van Duyne GD, Emanuele MJ, Lamond AI, Wagner EJ, Lorson CL, Matera AG. "Self-oligomerization regulates stability of survival motor neuron protein isoforms by sequestering an SCF degron." Molecular biology of the cell.. 2018 Jan 15; 29(2):96-110. Epub 2017 Nov 22.

1/12/2018
Masamha CP, Wagner EJ. "The contribution of alternative polyadenylation to the cancer phenotype." Carcinogenesis.. 2018 Jan 12; 39(1):2-10.

1/4/2018
Feng X, Li L, Wagner EJ, Li W. "TC3A: The Cancer 3' UTR Atlas." Nucleic acids research.. 2018 Jan 4; 46(D1):D1027-D1030.

9/2017
Peart N, Wagner EJ. "A distal auxiliary element facilitates cleavage and polyadenylation of Dux4 mRNA in the pathogenic haplotype of FSHD." Human genetics.. 2017 Sep; 136(9):1291-1301. Epub 2017 May 24.

8/2017
Oegema R, Baillat D, Schot R, van Unen LM, Brooks A, Kia SK, Hoogeboom AJM, Xia Z, Li W, Cesaroni M, Lequin MH, van Slegtenhorst M, Dobyns WB, de Coo IFM, van den Berg D, Verheijen FW, Kremer A, van der Spek PJ, Heijsman D, Wagner EJ, Fornerod M, Mancini GMS. "Correction: Human mutations in integrator complex subunits link transcriptome integrity to brain development." PLoS genetics.. 2017 Aug; 13(8):e1006923. Epub 2017 Aug 01.

7/7/2017
Routh A, Ji P, Jaworski E, Xia Z, Li W, Wagner EJ. "Poly(A)-ClickSeq: click-chemistry for next-generation 3?-end sequencing without RNA enrichment or fragmentation." Nucleic acids research.. 2017 Jul 7; 45(12):e112.

5/2017
Oegema R, Baillat D, Schot R, van Unen LM, Brooks A, Kia SK, Hoogeboom AJM, Xia Z, Li W, Cesaroni M, Lequin MH, van Slegtenhorst M, Dobyns WB, de Coo IFM, Verheijen FW, Kremer A, van der Spek PJ, Heijsman D, Wagner EJ, Fornerod M, Mancini GMS. "Human mutations in integrator complex subunits link transcriptome integrity to brain development." PLoS genetics.. 2017 May; 13(5):e1006809. Epub 2017 May 25.

4/25/2017
Wu Y, Albrecht TR, Baillat D, Wagner EJ, Tong L. "Molecular basis for the interaction between Integrator subunits IntS9 and IntS11 and its functional importance." Proceedings of the National Academy of Sciences of the United States of America.. 2017 Apr 25; 114(17):4394-4399. Epub 2017 Apr 10.

2017
Peart N, Wagner EJ. "Genome-Wide RNAi Screens for RNA Processing Events in Drosophila melanogaster S2 Cells." Methods in molecular biology.. 2017 1648:235-245.

12/2016
Baillat D, Russell WK, Wagner EJ. "CRISPR-Cas9 mediated genetic engineering for the purification of the endogenous integrator complex from mammalian cells." Protein expression and purification.. 2016 Dec; 128:101-8. Epub 2016 Aug 19.

6/2016
Masamha CP, Xia Z, Peart N, Collum S, Li W, Wagner EJ, Shyu AB. "CFIm25 regulates glutaminase alternative terminal exon definition to modulate miR-23 function." RNA.. 2016 Jun; 22(6):830-8. Epub 2016 Apr 19.

3/29/2016
Masamha CP, Albrecht TR, Wagner EJ. "Discovery and characterization of a novel CCND1/MRCK gene fusion in mantle cell lymphoma." Journal of hematology & oncology.. 2016 Mar 29; 9:30. Epub 2016 Mar 29.

2016
Peart N, Wagner EJ. "Gain-of-function reporters for analysis of mRNA 3'-end formation: Design and optimization." BioTechniques.. 2016 60(3):137-40. Epub 2016 Mar 01.

5/2015
Baillat D, Wagner EJ. "Integrator: surprisingly diverse functions in gene expression." Trends in biochemical sciences.. 2015 May; 40(5):257-64. Epub 2015 Apr 13.

11/20/2014
Xia Z, Donehower LA, Cooper TA, Neilson JR, Wheeler DA, Wagner EJ, Li W. "Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3'-UTR landscape across seven tumour types." Nature communications.. 2014 Nov 20; 5:5274. Epub 2014 Nov 20.

10/2/2014
Gardini A, Baillat D, Cesaroni M, Hu D, Marinis JM, Wagner EJ, Lazar MA, Shilatifard A, Shiekhattar R. "Integrator regulates transcriptional initiation and pause release following activation." Molecular cell.. 2014 Oct 2; 56(1):128-139. Epub 2014 Sep 04.

6/19/2014
Masamha CP, Xia Z, Yang J, Albrecht TR, Li M, Shyu AB, Li W, Wagner EJ. "CFIm25 links alternative polyadenylation to glioblastoma tumour suppression." Nature.. 2014 Jun 19; 510(7505):412-6. Epub 2014 May 11.

3/20/2014
Zhang KL, Zhou X, Han L, Chen LY, Chen LC, Shi ZD, Yang M, Ren Y, Yang JX, Frank TS, Zhang CB, Zhang JX, Pu PY, Zhang JN, Jiang T, Wagner EJ, Li M, Kang CS. "MicroRNA-566 activates EGFR signaling and its inhibition sensitizes glioblastoma cells to nimotuzumab." Molecular cancer.. 2014 Mar 20; 13:63. Epub 2014 Mar 20.

12/15/2013
Jodoin JN, Shboul M, Albrecht TR, Lee E, Wagner EJ, Reversade B, Lee LA. "The snRNA-processing complex, Integrator, is required for ciliogenesis and dynein recruitment to the nuclear envelope via distinct mechanisms." Biology open.. 2013 Dec 15; 2(12):1390-6. Epub 2013 Dec 15.

9/2013
Jodoin JN, Sitaram P, Albrecht TR, May SB, Shboul M, Lee E, Reversade B, Wagner EJ, Lee LA. "Nuclear-localized Asunder regulates cytoplasmic dynein localization via its role in the integrator complex." Molecular biology of the cell.. 2013 Sep; 24(18):2954-65. Epub 2013 Jul 31.

8/2013
Wang S, Wagner EJ, Mattox W. "Half pint/Puf68 is required for negative regulation of splicing by the SR splicing factor Transformer2." RNA biology.. 2013 Aug; 10(8):1396-406. Epub 2013 Jul 09.

2/15/2013
Chen J, Waltenspiel B, Warren WD, Wagner EJ. "Functional analysis of the integrator subunit 12 identifies a microdomain that mediates activation of the Drosophila integrator complex." The Journal of biological chemistry.. 2013 Feb 15; 288(7):4867-77. Epub 2013 Jan 03.

2013
Peart N, Sataluri A, Baillat D, Wagner EJ. "Non-mRNA 3' end formation: how the other half lives." Wiley interdisciplinary reviews. RNA.. 2013 4(5):491-506. Epub 2013 Jun 10.

12/2012
Chen J, Ezzeddine N, Waltenspiel B, Albrecht TR, Warren WD, Marzluff WF, Wagner EJ. "An RNAi screen identifies additional members of the Drosophila Integrator complex and a requirement for cyclin C/Cdk8 in snRNA 3'-end formation." RNA.. 2012 Dec; 18(12):2148-56. Epub 2012 Oct 24.

3/2012
Albrecht TR, Wagner EJ. "snRNA 3' end formation requires heterodimeric association of integrator subunits." Molecular and cellular biology.. 2012 Mar; 32(6):1112-23. Epub 2012 Jan 17.

1/23/2012
Wagner EJ, Carpenter PB. "Understanding the language of Lys36 methylation at histone H3." Nature reviews. Molecular cell biology.. 2012 Jan 23; 13(2):115-26. Epub 2012 Jan 23.

11/2011
van Hoof A, Wagner EJ. "A brief survey of mRNA surveillance." Trends in biochemical sciences.. 2011 Nov; 36(11):585-92. Epub 2011 Sep 06.

1/2011
Ezzeddine N, Chen J, Waltenspiel B, Burch B, Albrecht T, Zhuo M, Warren WD, Marzluff WF, Wagner EJ. "A subset of Drosophila integrator proteins is essential for efficient U7 snRNA and spliceosomal snRNA 3'-end formation." Molecular and cellular biology.. 2011 Jan; 31(2):328-41. Epub 2010 Nov 15.

8/2010
Chen J, Wagner EJ. "snRNA 3' end formation: the dawn of the Integrator complex." Biochemical Society transactions.. 2010 Aug; 38(4):1082-7.

3/2009
Sullivan KD, Mullen TE, Marzluff WF, Wagner EJ. "Knockdown of SLBP results in nuclear retention of histone mRNA." RNA.. 2009 Mar; 15(3):459-72. Epub 2009 Jan 20.

11/2008
Marzluff WF, Wagner EJ, Duronio RJ. "Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail." Nature reviews. Genetics.. 2008 Nov; 9(11):843-54.

2/2008
Cakmakci NG, Lerner RS, Wagner EJ, Zheng L, Marzluff WF. "SLIP1, a factor required for activation of histone mRNA translation by the stem-loop binding protein." Molecular and cellular biology.. 2008 Feb; 28(3):1182-94. Epub 2007 Nov 19.

11/30/2007
Wagner EJ, Burch BD, Godfrey AC, Salzler HR, Duronio RJ, Marzluff WF. "A genome-wide RNA interference screen reveals that variant histones are necessary for replication-dependent histone pre-mRNA processing." Molecular cell.. 2007 Nov 30; 28(4):692-9.

9/2006
Wagner EJ, Marzluff WF. "ZFP100, a component of the active U7 snRNP limiting for histone pre-mRNA processing, is required for entry into S phase." Molecular and cellular biology.. 2006 Sep; 26(17):6702-12.

7/28/2006
Richardson RT, Alekseev OM, Grossman G, Widgren EE, Thresher R, Wagner EJ, Sullivan KD, Marzluff WF, O'Rand MG. "Nuclear autoantigenic sperm protein (NASP), a linker histone chaperone that is required for cell proliferation." The Journal of biological chemistry.. 2006 Jul 28; 281(30):21526-21534. Epub 2006 May 25.

7/2006
Wagner EJ, Ospina JK, Hu Y, Dundr M, Matera AG, Marzluff WF. "Conserved zinc fingers mediate multiple functions of ZFP100, a U7snRNP associated protein." RNA.. 2006 Jul; 12(7):1206-18. Epub 2006 May 18.

6/2005
Erkmann JA, Wagner EJ, Dong J, Zhang Y, Kutay U, Marzluff WF. "Nuclear import of the stem-loop binding protein and localization during the cell cycle." Molecular biology of the cell.. 2005 Jun; 16(6):2960-71. Epub 2005 Apr 13.

6/2005
Wagner EJ, Berkow A, Marzluff WF. "Expression of an RNAi-resistant SLBP restores proper S-phase progression." Biochemical Society transactions.. 2005 Jun; 33(Pt 3):471-3.

5/2005
Florez PM, Sessions OM, Wagner EJ, Gromeier M, Garcia-Blanco MA. "The polypyrimidine tract binding protein is required for efficient picornavirus gene expression and propagation." Journal of virology.. 2005 May; 79(10):6172-9.

4/8/2005
Wagner EJ, Baraniak AP, Sessions OM, Mauger D, Moskowitz E, Garcia-Blanco MA. "Characterization of the intronic splicing silencers flanking FGFR2 exon IIIb." The Journal of biological chemistry.. 2005 Apr 8; 280(14):14017-27. Epub 2005 Jan 31.

2/2005
Dominski Z, Yang XC, Purdy M, Wagner EJ, Marzluff WF. "A CPSF-73 homologue is required for cell cycle progression but not cell growth and interacts with a protein having features of CPSF-100." Molecular and cellular biology.. 2005 Feb; 25(4):1489-500.

1/16/2004
Wollerton MC, Gooding C, Wagner EJ, Garcia-Blanco MA, Smith CW. "Autoregulation of polypyrimidine tract binding protein by alternative splicing leading to nonsense-mediated decay." Molecular cell.. 2004 Jan 16; 13(1):91-100.

2004
Wagner EJ, Baines A, Albrecht T, Brazas RM, Garcia-Blanco MA. "Imaging alternative splicing in living cells." Methods in molecular biology.. 2004 257:29-46.

12/2003
Wagner EJ, Curtis ML, Robson ND, Baraniak AP, Eis PS, Garcia-Blanco MA. "Quantification of alternatively spliced FGFR2 RNAs using the RNA invasive cleavage assay." RNA.. 2003 Dec; 9(12):1552-61.

12/2003
Baraniak AP, Lasda EL, Wagner EJ, Garcia-Blanco MA. "A stem structure in fibroblast growth factor receptor 2 transcripts mediates cell-type-specific splicing by approximating intronic control elements." Molecular and cellular biology.. 2003 Dec; 23(24):9327-37.

2/2003
Mistry N, Harrington W, Lasda E, Wagner EJ, Garcia-Blanco MA. "Of urchins and men: evolution of an alternative splicing unit in fibroblast growth factor receptor genes." RNA.. 2003 Feb; 9(2):209-17.

10/2002
Wagner EJ, Garcia-Blanco MA. "RNAi-mediated PTB depletion leads to enhanced exon definition." Molecular cell.. 2002 Oct; 10(4):943-9.

6/2002
Zeng Y, Wagner EJ, Cullen BR. "Both natural and designed micro RNAs can inhibit the expression of cognate mRNAs when expressed in human cells." Molecular cell.. 2002 Jun; 9(6):1327-33.

5/2001
Wagner EJ, Garcia-Blanco MA. "Polypyrimidine tract binding protein antagonizes exon definition." Molecular and cellular biology.. 2001 May; 21(10):3281-8.

1999
Wagner EJ, Carstens RP, Garcia-Blanco MA. "A novel isoform ratio switch of the polypyrimidine tract binding protein." Electrophoresis.. 1999 20(4-5):1082-6.