Jermaine L. Jenkins, Ph.D.

Jermaine L. Jenkins, Ph.D.

Contact Information

University of Rochester Medical Center
School of Medicine and Dentistry
601 Elmwood Ave, Box 712
Rochester, NY 14642

Journal Articles

Showing all 20 journal articles available.

2016 Oct 21
Sparks RP, Jenkins JL, Miner GE, Wang Y, Guida WC, Sparks CE, Fratti RA, Sparks JD. "Phosphatidylinositol (3,4,5)-trisphosphate binds to sortilin and competes with neurotensin: Implications for very low density lipoprotein binding." Biochemical and biophysical research communications. 2016 Oct 21; 479(3):551-556. Epub 2016 Sep 22.
2016 Sep 16
Sparks RP, Guida WC, Sowden MP, Jenkins JL, Starr ML, Fratti RA, Sparks CE, Sparks JD. "Sortilin facilitates VLDL-B100 secretion by insulin sensitive McArdle RH7777 cells." Biochemical and biophysical research communications. 2016 Sep 16; 478(2):546-52. Epub 2016 Aug 02.
2016 Aug
Miralem T, Lerner-Marmarosh N, Gibbs PE, Jenkins JL, Heimiller C, Maines MD. "Interaction of human biliverdin reductase with Akt/protein kinase B and phosphatidylinositol-dependent kinase 1 regulates glycogen synthase kinase 3 activity: a novel mechanism of Akt activation." FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2016 Aug; 30(8):2926-44. Epub 2016 May 10.
2016 Mar 8
Agrawal AA, Salsi E, Chatrikhi R, Henderson S, Jenkins JL, Green MR, Ermolenko DN, Kielkopf CL. "An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal." Nature communications. 2016 Mar 8; 7:10950. Epub 2016 Mar 08.
Jenkins JL, Wedekind JE. "The Quick and the Dead: A Guide to Fast Phasing of Small Ribozyme and Riboswitch Crystal Structures." Methods in molecular biology. 2016 1490:265-80.
Agrawal AA, McLaughlin KJ, Jenkins JL, Kielkopf CL. "Structure-guided U2AF65 variant improves recognition and splicing of a defective pre-mRNA." Proceedings of the National Academy of Sciences of the United States of America. 2014 111(49):17420-5. Epub 2014 Nov 24.
Liberman JA, Bogue JT, Jenkins JL, Salim M, Wedekind JE. "ITC analysis of ligand binding to preQ? riboswitches." Methods in enzymology. 2014 549:435-50.
2013 Apr 1
Jenkins JL, Agrawal AA, Gupta A, Green MR, Kielkopf CL. "U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs." Nucleic acids research. 2013 Apr 1; 41(6):3859-73. Epub 2013 Feb 01.
2012 Oct 17
Liberman JA, Guo M, Jenkins JL, Krucinska J, Chen Y, Carey PR, Wedekind JE. "A transition-state interaction shifts nucleobase ionization toward neutrality to facilitate small ribozyme catalysis." Journal of the American Chemical Society. 2012 Oct 17; 134(41):16933-6. Epub 2012 Oct 03.
2012 Jul 3
Jenkins JL, Laird KM, Kielkopf CL. "A Broad range of conformations contribute to the solution ensemble of the essential splicing factor U2AF(65)." Biochemistry. 2012 Jul 3; 51(26):5223-5. Epub 2012 Jun 19.
2012 Jan 27
Bauer WJ, Heath J, Jenkins JL, Kielkopf CL. "Three RNA recognition motifs participate in RNA recognition and structural organization by the pro-apoptotic factor TIA-1." Journal of molecular biology. 2012 Jan 27; 415(4):727-40. Epub 2011 Dec 02.
Lippa GM, Liberman JA, Jenkins JL, Krucinska J, Salim M, Wedekind JE. "Crystallographic analysis of small ribozymes and riboswitches." Methods in molecular biology. 2012 848:159-84.
2011 Jul 15
Jenkins JL, Krucinska J, McCarty RM, Bandarian V, Wedekind JE. "Comparison of a preQ1 riboswitch aptamer in metabolite-bound and free states with implications for gene regulation." The Journal of biological chemistry. 2011 Jul 15; 286(28):24626-37. Epub 2011 May 18.
2011 Mar 8
McLaughlin KJ, Jenkins JL, Kielkopf CL. "Large favorable enthalpy changes drive specific RNA recognition by RNA recognition motif proteins." Biochemistry. 2011 Mar 8; 50(9):1429-31. Epub 2011 Feb 02.
2011 Feb 4
Gupta A, Jenkins JL, Kielkopf CL. "RNA induces conformational changes in the SF1/U2AF65 splicing factor complex." Journal of molecular biology. 2011 Feb 4; 405(5):1128-38. Epub 2010 Dec 10.
2008 Nov 28
Jenkins JL, Shen H, Green MR, Kielkopf CL. "Solution conformation and thermodynamic characteristics of RNA binding by the splicing factor U2AF65." The Journal of biological chemistry. 2008 Nov 28; 283(48):33641-9. Epub 2008 Oct 08.
Jenkins, J.L; Shen H.; Green M.R.; Kielkopf. "Solution Conformation and Thermodynamic Characteristics of RNA binding by Splicing Factor U2AF65". J. Biol. Chem. 2008; 283: 33641-33649.
Zhou Y.; Larson J.D.; Bottoms C.A.; Arturo E.C.; Henzl M.T.; Jenkins, J.L; Nix J.C.; Becker D.F.; Tanner, J.J. "Structural Basis of the Transcriptional Regulation of the Proline Utilization Regulon by Multifunctional PutA". J. Mol. Biol. 2008; 381: 174-188.
Larson, J.D.; Jenkins, J.L.; Schuermann, J.P.; Zhou, Y.; Becker, D.F.; Tanner, J.J. "Crystal Structures of the DNA-binding Domain of Escherichia coli Proline Utilization A Flavoprotein and Analysis of the Role of Lys9 in DNA Recognition". Protein Science. 2006; v15: 2630-2641.
Jenkins, J.L.; Tanner, J.J. "High Resolution Crystal Structure of Human D-Glyceraldehyde-3-Phosphate Dehydrogenase". Acta Crystallogr. 2006; D62: 290-301.