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Xing Qiu, Ph.D.

Contact Information

University of Rochester Medical Center
School of Medicine and Dentistry
601 Elmwood Ave, Box 630
Rochester, NY 14642

Books

2012
Xing Qiu and Lev Klebanov. "Gene selection with the delta-sequence method". Statistical Methods for Microarray Data Analysis. : Humana Press, 2012.

Journal Articles

Showing all 29 journal articles available.

2013
Qiu X, Klebanov L. "Gene selection with the ?-sequence method." Methods in molecular biology.. 2013 972:57-71.
2013
Henn AD, Wu S, Qiu X, Ruda M, Stover M, Yang H, Liu Z, Welle SL, Holden-Wiltse J, Wu H, Zand MS. "High-resolution temporal response patterns to influenza vaccine reveal a distinct human plasma cell gene signature." Scientific reports.. 2013 3:2327.
2013
Zhu T, Hu R, Tian W, Ekholm S, Schifitto G, Qiu X, Zhong J. "SPatial REgression Analysis of Diffusion tensor imaging (SPREAD) for longitudinal progression of neurodegenerative disease in individual subjects." Magnetic resonance imaging. 2013 31(10):1657-67. Epub 2013 Oct 05.
2012 Nov 13
Smolock EM, Korshunov VA, Glazko G, Qiu X, Gerloff J, Berk B. "Ribosomal protein L17, RpL17, is an inhibitor of vascular smooth muscle growth and carotid intima formation." Circulation.. 2012 Nov 13; 126(20):2418-27. Epub 2012 Oct 12.
2012 Jul
Liu X, Tian W, Qiu X, Li J, Thomson S, Li L, Wang HZ. "Correlation analysis of quantitative diffusion parameters in ipsilateral cerebral peduncle during Wallerian degeneration with motor function outcome after cerebral ischemic stroke." Journal of neuroimaging : official journal of the American Society of Neuroimaging.. 2012 Jul; 22(3):255-60. Epub 2011 Jun 23.
2012 Feb
Liu X, Tian W, Li L, Kolar B, Qiu X, Chen F, Dogra VS. "Hyperintensity on diffusion weighted image along ipsilateral cortical spinal tract after cerebral ischemic stroke: a diffusion tensor analysis." European journal of radiology. 2012 Feb; 81(2):292-7. Epub 2011 Jan 17.
2012
Henn AD, Laski M, Yang H, Welle S, Qiu X, Miao H, Barry CT, Wu H, Zand MS. "Functionally Distinct Subpopulations of CpG-Activated Memory B Cells." Scientific reports.. 2012 2:345. Epub 2012 Mar 30.
2011 Nov
Groom L, Muldoon SM, Tang ZZ, Brandom BW, Bayarsaikhan M, Bina S, Lee HS, Qiu X, Sambuughin N, Dirksen RT. "Identical de novo mutation in the type 1 ryanodine receptor gene associated with fatal, stress-induced malignant hyperthermia in two unrelated families." Anesthesiology.. 2011 Nov; 115(5):938-45.
2011 Jul
Hu Y, Bandla S, Godfrey TE, Tan D, Luketich JD, Pennathur A, Qiu X, Hicks DG, Peters JH, Zhou Z. "HER2 amplification, overexpression and score criteria in esophageal adenocarcinoma." Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc. 2011 Jul; 24(7):899-907. Epub 2011 Apr 01.
2011 Jun 1
Zhu T, Hu R, Qiu X, Taylor M, Tso Y, Yiannoutsos C, Navia B, Mori S, Ekholm S, Schifitto G, Zhong J. "Quantification of accuracy and precision of multi-center DTI measurements: a diffusion phantom and human brain study." NeuroImage. 2011 Jun 1; 56(3):1398-411. Epub 2011 Feb 18.
2011 Jun 1
Sanders JO, Howell J, Qiu X. "Comparison of the Paley method using chronological age with use of skeletal maturity for predicting mature limb length in children." The Journal of bone and joint surgery. American volume.. 2011 Jun 1; 93(11):1051-6.
2011 Apr
Liu X, Tian W, Kolar B, Yeaney GA, Qiu X, Johnson MD, Ekholm S. "MR diffusion tensor and perfusion-weighted imaging in preoperative grading of supratentorial nonenhancing gliomas." Neuro-oncology. 2011 Apr; 13(4):447-55. Epub 2011 Feb 04.
2011
Needham M, Hu R, Dwarkadas S, Qiu X. "Hierarchical parallelization of gene differential association analysis." BMC bioinformatics. 2011 12:374. Epub 2011 Sep 21.
2010 Apr
Sepesi B, Watson TJ, Zhou D, Polomsky M, Litle VR, Jones CE, Raymond DP, Hu R, Qiu X, Peters JH. "Are endoscopic therapies appropriate for superficial submucosal esophageal adenocarcinoma? An analysis of esophagectomy specimens." Journal of the American College of Surgeons. 2010 Apr; 210(4):418-27.
2010 Feb 1
Hu R, Qiu X, Glazko G. "A new gene selection procedure based on the covariance distance." Bioinformatics (Oxford, England). 2010 Feb 1; 26(3):348-54. Epub 2009 Dec 08.
2009 May 29
Nott SL, Huang Y, Li X, Fluharty BR, Qiu X, Welshons WV, Yeh S, Muyan M. "Genomic responses from the estrogen-responsive element-dependent signaling pathway mediated by estrogen receptor alpha are required to elicit cellular alterations." The Journal of biological chemistry.. 2009 May 29; 284(22):15277-88. Epub 2009 Mar 24.
2009
Will RE, Stokes IA, Qiu X, Walker MR, Sanders JO. "Cobb angle progression in adolescent scoliosis begins at the intervertebral disc." Spine. 2009 34(25):2782-6.
2009
Hu R, Qiu X, Glazko G, Klebanov L, Yakovlev A. "Detecting intergene correlation changes in microarray analysis: a new approach to gene selection." BMC bioinformatics. 2009 10:20. Epub 2009 Jan 15.
2009
Sepesi B, Raymond DP, Polomsky M, Watson TJ, Litle VR, Jones CE, Hu R, Qiu X, Peters JH. "Does the value of PET-CT extend beyond pretreatment staging? An analysis of survival in surgical patients with esophageal cancer." Journal of gastrointestinal surgery : official journal of the Society for Surgery of the Alimentary Tract. 2009 13(12):2121-7. Epub 2009 Oct 01.
2008 May
Li X, Nott SL, Huang Y, Hilf R, Bambara RA, Qiu X, Yakovlev A, Welle S, Muyan M. "Gene expression profiling reveals that the regulation of estrogen-responsive element-independent genes by 17 beta-estradiol-estrogen receptor beta is uncoupled from the induction of phenotypic changes in cell models." Journal of molecular endocrinology.. 2008 May; 40(5):211-29.
2008 Apr
Klebanov L, Qiu X, Yakovlev A. "Testing differential expression in nonoverlapping gene pairs: a new perspective for the empirical Bayes method." Journal of bioinformatics and computational biology. 2008 Apr; 6(2):301-16.
2008 Mar
Wuertzer CA, Sullivan MA, Qiu X, Federoff HJ. "CNS delivery of vectored prion-specific single-chain antibodies delays disease onset." Molecular therapy : the journal of the American Society of Gene Therapy. 2008 Mar; 16(3):481-6. Epub 2008 Jan 08.
2007 Aug
Qiu X, Yakovlev A. "Comments on probabilistic models behind the concept of false discovery rate." Journal of bioinformatics and computational biology. 2007 Aug; 5(4):963-75.
2007 Jan
Klebanov L, Qiu X, Welle S, Yakovlev A. "Statistical methods and microarray data." Nature biotechnology. 2007 Jan; 25(1):25-6; author reply 26-7.
2006 Oct
Qiu X, Yakovlev A. "Some comments on instability of false discovery rate estimation." Journal of bioinformatics and computational biology. 2006 Oct; 4(5):1057-68.
2006 Jul
Almudevar A, Klebanov LB, Qiu X, Salzman P, Yakovlev AY. "Utility of correlation measures in analysis of gene expression." NeuroRx : the journal of the American Society for Experimental NeuroTherapeutics. 2006 Jul; 3(3):384-95.
2006
Qiu X, Xiao Y, Gordon A, Yakovlev A. "Assessing stability of gene selection in microarray data analysis." BMC bioinformatics. 2006 7:50. Epub 2006 Feb 01.
2005
Qiu X, Brooks AI, Klebanov L, Yakovlev N. "The effects of normalization on the correlation structure of microarray data." BMC bioinformatics. 2005 6:120. Epub 2005 May 16.
2005
Qiu X, Klebanov L, Yakovlev A. "Correlation between gene expression levels and limitations of the empirical bayes methodology for finding differentially expressed genes." Statistical applications in genetics and molecular biology. 2005 4:Article34. Epub 2005 Nov 22.