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Steven R. Gill, Ph.D.


Showing all 100 journal articles & 0 books available

Journal Articles

Grier A, Gill AL, Kessler HA, Corbett A, Bandyopadhyay S, Java J, Holden-Wiltse J, Falsey AR, Topham DJ, Mariani TJ, Caserta MT, Walsh EE, Gill SR. "Temporal Dysbiosis of Infant Nasal Microbiota Relative to Respiratory Syncytial Virus Infection." The Journal of infectious diseases.. 2020 Sep 14; Epub 2020 Sep 14.

Chu CY, Qiu X, McCall MN, Wang L, Corbett A, Holden-Wiltse J, Slaunwhite C, Grier A, Gill SR, Pryhuber GS, Falsey AR, Topham DJ, Caserta MT, Walsh EE, Mariani TJ. "Airway gene expression correlates of RSV disease severity and microbiome composition in infants." The Journal of infectious diseases.. 2020 Sep 14; Epub 2020 Sep 14.

Dunning Hotopp JC, Baltrus DA, Bruno VM, Dennehy JJ, Gill SR, Maresca JA, Matthijnssens J, Newton ILG, Putonti C, Rasko DA, Rokas A, Roux S, Stajich JE, Stedman KM, Stewart FJ, Thrash JC. "Best Practices for Successfully Writing and Publishing a Genome Announcement in ." Microbiology resource announcements.. 2020 Sep 3; 9(36)Epub 2020 Sep 03.

Xiao J, Fiscella KA, Gill SR. "Oral microbiome: possible harbinger for children's health." International journal of oral science.. 2020 Apr 30; 12(1):12. Epub 2020 Apr 30.

Favazzo LJ, Hendesi H, Villani DA, Soniwala S, Dar QA, Schott EM, Gill SR, Zuscik MJ. "The gut microbiome-joint connection: implications in osteoarthritis." Current opinion in rheumatology.. 2020 Jan 0; 32(1):92-101.

Sonawane AR, Tian L, Chu CY, Qiu X, Wang L, Holden-Wiltse J, Grier A, Gill SR, Caserta MT, Falsey AR, Topham DJ, Walsh EE, Mariani TJ, Weiss ST, Silverman EK, Glass K, Liu YY. "Microbiome-Transcriptome Interactions Related to Severity of Respiratory Syncytial Virus Infection." Scientific reports.. 2019 Sep 25; 9(1):13824. Epub 2019 Sep 25.

Caserta MT, Yang H, Bandyopadhyay S, Qiu X, Gill SR, Java J, McDavid A, Falsey AR, Topham DJ, Holden-Wiltse J, Scheible K, Pryhuber G. "Measuring the Severity of Respiratory Illness in the First 2 Years of Life in Preterm and Term Infants." The Journal of pediatrics.. 2019 Jul 31; Epub 2019 Jul 31.

Masters EA, Salminen AT, Begolo S, Luke EN, Barrett SC, Overby CT, Gill AL, de Mesy Bentley KL, Awad HA, Gill SR, Schwarz EM, McGrath JL. "An in vitro platform for elucidating the molecular genetics of S. aureus invasion of the osteocyte lacuno-canalicular network during chronic osteomyelitis." Nanomedicine : nanotechnology, biology, and medicine.. 2019 Jun 24; :102039. Epub 2019 Jun 24.

Walsh EE, Mariani TJ, Chu C, Grier A, Gill SR, Qiu X, Wang L, Holden-Wiltse J, Corbett A, Thakar J, Benoodt L, McCall MN, Topham DJ, Falsey AR, Caserta MT. "Aims, Study Design, and Enrollment Results From the Assessing Predictors of Infant Respiratory Syncytial Virus Effects and Severity Study." JMIR research protocols. 2019 Jun 6; 8(6):e12907. Epub 2019 Jun 06.

Favazzo LJ, Gill AL, Farnsworth CW, Mooney RA, Gill SR. "Response of and contributes to virulence and metabolism." Journal of bacteriology.. 2019 Feb 19; Epub 2019 Feb 19.

Xiao J, Grier A, Faustoferri RC, Alzoubi S, Gill AL, Feng C, Liu Y, Quivey RG, Kopycka-Kedzierawski DT, Koo H, Gill SR. "Association between Oral Candida and Bacteriome in Children with Severe ECC." Journal of dental research.. 2018 Dec 0; 97(13):1468-1476. Epub 2018 Jul 26.

Oh I, Muthukrishnan G, Ninomiya MJ, Brodell JD, Smith BL, Lee CC, Gill SR, Beck CA, Schwarz EM, Daiss JL. "Tracking Anti- Antibodies Produced and during Foot Salvage Therapy for Diabetic Foot Infections Reveals Prognostic Insights and Evidence of Diversified Humoral Immunity." Infection and immunity.. 2018 Dec 0; 86(12)Epub 2018 Nov 20.

Farnsworth CW, Schott EM, Benvie A, Kates SL, Schwarz EM, Gill SR, Zuscik MJ, Mooney RA. "Exacerbated Foot Infections in Obese/Diabetic Mice Are Associated with Impaired Germinal Center Reactions, Ig Class Switching, and Humoral Immunity." The Journal of immunology : official journal of the American Association of Immunologists.. 2018 Jul 15; 201(2):560-572. Epub 2018 Jun 01.

Farnsworth CW, Schott EM, Benvie AM, Zukoski J, Kates SL, Schwarz EM, Gill SR, Zuscik MJ, Mooney RA. "Obesity/type 2 diabetes increases inflammation, periosteal reactive bone formation, and osteolysis during Staphylococcus aureus implant-associated bone infection." Journal of orthopaedic research : official publication of the Orthopaedic Research Society.. 2018 Jun 0; 36(6):1614-1623. Epub 2018 Jan 03.

Schott EM, Farnsworth CW, Grier A, Lillis JA, Soniwala S, Dadourian GH, Bell RD, Doolittle ML, Villani DA, Awad H, Ketz JP, Kamal F, Ackert-Bicknell C, Ashton JM, Gill SR, Mooney RA, Zuscik MJ. "Targeting the gut microbiome to treat the osteoarthritis of obesity." JCI insight.. 2018 Apr 19; 3(8)Epub 2018 Apr 19.

Rieth KKS, Gill SR, Lott-Limbach AA, Merkley MA, Botero N, Allen PD, Miller MC. "Prevalence of High-Risk Human Papillomavirus in Tonsil Tissue in Healthy Adults and Colocalization in Biofilm of Tonsillar Crypts." JAMA otolaryngology-- head & neck surgery.. 2018 Mar 1; 144(3):231-237.

Caito SW, Jackson BP, Punshon T, Scrimale T, Grier A, Gill SR, Love TM, Watson GE, van Wijngaarden E, Rand MD. "Editor's Highlight: Variation in Methylmercury Metabolism and Elimination Status in Humans Following Fish Consumption." Toxicological sciences : an official journal of the Society of Toxicology.. 2018 Feb 1; 161(2):443-453.

Grier A, Qiu X, Bandyopadhyay S, Holden-Wiltse J, Kessler HA, Gill AL, Hamilton B, Huyck H, Misra S, Mariani TJ, Ryan RM, Scholer L, Scheible KM, Lee YH, Caserta MT, Pryhuber GS, Gill SR. "Impact of prematurity and nutrition on the developing gut microbiome and preterm infant growth." Microbiome.. 2017 Dec 11; 5(1):158. Epub 2017 Dec 11.

Bhattacharya S, Rosenberg AF, Peterson DR, Grzesik K, Baran AM, Ashton JM, Gill SR, Corbett AM, Holden-Wiltse J, Topham DJ, Walsh EE, Mariani TJ, Falsey AR. "Transcriptomic Biomarkers to Discriminate Bacterial from Nonbacterial Infection in Adults Hospitalized with Respiratory Illness." Scientific reports.. 2017 Jul 26; 7(1):6548. Epub 2017 Jul 26.

Farnsworth CW, Schott EM, Jensen SE, Zukoski J, Benvie AM, Refaai MA, Kates SL, Schwarz EM, Zuscik MJ, Gill SR, Mooney RA. "Adaptive Upregulation of Clumping Factor A (ClfA) by Staphylococcus aureus in the Obese, Type 2 Diabetic Host Mediates Increased Virulence." Infection and immunity.. 2017 Jun 0; 85(6)Epub 2017 May 23.

Caserta MT, Yang H, Gill SR, Holden-Wiltse J, Pryhuber G. "Viral Respiratory Infections in Preterm Infants during and after Hospitalization." The Journal of pediatrics.. 2017 Mar 0; 182:53-58.e3. Epub 2016 Dec 30.

Nakatsuji T, Chen TH, Narala S, Chun KA, Two AM, Yun T, Shafiq F, Kotol PF, Bouslimani A, Melnik AV, Latif H, Kim JN, Lockhart A, Artis K, David G, Taylor P, Streib J, Dorrestein PC, Grier A, Gill SR, Zengler K, Hata TR, Leung DY, Gallo RL. "Antimicrobials from human skin commensal bacteria protect against and are deficient in atopic dermatitis." Science translational medicine.. 2017 Feb 22; 9(378)

Chu CY, Qiu X, Wang L, Bhattacharya S, Lofthus G, Corbett A, Holden-Wiltse J, Grier A, Tesini B, Gill SR, Falsey AR, Caserta MT, Walsh EE, Mariani TJ. "The Healthy Infant Nasal Transcriptome: A Benchmark Study." Scientific reports.. 2016 Sep 23; 6:33994. Epub 2016 Sep 23.

Lenhard JR, Brown T, Rybak MJ, Meaney CJ, Norgard NB, Bulman ZP, Brazeau D, Gill SR, Tsuji BT. "Sequential Evolution of Vancomycin-Intermediate Resistance Alters Virulence in Staphylococcus aureus: Pharmacokinetic/Pharmacodynamic Targets for Vancomycin Exposure." Antimicrobial agents and chemotherapy.. 2015 Dec 28; 60(3):1584-91. Epub 2015 Dec 28.

Strange C, Senior RM, Sciurba F, O'Neal S, Morris A, Wisniewski SR, Bowler R, Hochheiser HS, Becich MJ, Zhang Y, Leader JK, Methé BA, Kaminski N, Sandhaus RA, . "Rationale and Design of the Genomic Research in Alpha-1 Antitrypsin Deficiency and Sarcoidosis Study. Alpha-1 Protocol." Annals of the American Thoracic Society.. 2015 Oct 0; 12(10):1551-60.

Moller DR, Koth LL, Maier LA, Morris A, Drake W, Rossman M, Leader JK, Collman RG, Hamzeh N, Sweiss NJ, Zhang Y, O'Neal S, Senior RM, Becich M, Hochheiser HS, Kaminski N, Wisniewski SR, Gibson KF, . "Rationale and Design of the Genomic Research in Alpha-1 Antitrypsin Deficiency and Sarcoidosis (GRADS) Study. Sarcoidosis Protocol." Annals of the American Thoracic Society.. 2015 Oct 0; 12(10):1561-71.

Merkley MA, Bice TC, Grier A, Strohl AM, Man LX, Gill SR. "The effect of antibiotics on the microbiome in acute exacerbations of chronic rhinosinusitis." International forum of allergy & rhinology.. 2015 Oct 0; 5(10):884-93. Epub 2015 Jul 30.

Sharma-Kuinkel BK, Mongodin EF, Myers JR, Vore KL, Canfield GS, Fraser CM, Rude TH, Fowler VG, Gill SR. "Potential Influence of Staphylococcus aureus Clonal Complex 30 Genotype and Transcriptome on Hematogenous Infections." Open forum infectious diseases.. 2015 Sep 0; 2(3):ofv093. Epub 2015 Jun 24.

Dardas M, Gill SR, Grier A, Pryhuber GS, Gill AL, Lee YH, Guillet R. "The impact of postnatal antibiotics on the preterm intestinal microbiome." Pediatric research.. 2014 Aug 0; 76(2):150-8. Epub 2014 May 12.

Edholm ES, Albertorio Saez LM, Gill AL, Gill SR, Grayfer L, Haynes N, Myers JR, Robert J. "Nonclassical MHC class I-dependent invariant T cells are evolutionarily conserved and prominent from early development in amphibians." Proceedings of the National Academy of Sciences of the United States of America.. 2013 Aug 27; 110(35):14342-7. Epub 2013 Aug 12.

Russo TA, Gill SR. "Draft Genome Sequence of the Hypervirulent Klebsiella pneumoniae Strain hvKP1, Isolated in Buffalo, New York." Genome announcements.. 2013 Mar 14; 1(2):e0006513. Epub 2013 Mar 14.

Zhu L, Baker SS, Gill C, Liu W, Alkhouri R, Baker RD, Gill SR. "Characterization of gut microbiomes in nonalcoholic steatohepatitis (NASH) patients: a connection between endogenous alcohol and NASH." Hepatology : official journal of the American Association for the Study of Liver Diseases.. 2013 Feb 0; 57(2):601-9. Epub 2013 Jan 08.

Canfield GS, Schwingel JM, Foley MH, Vore KL, Boonanantanasarn K, Gill AL, Sutton MD, Gill SR. "Evolution in fast forward: a potential role for mutators in accelerating Staphylococcus aureus pathoadaptation." Journal of bacteriology.. 2013 Feb 0; 195(3):615-28. Epub 2012 Nov 30.

Boonanantanasarn K, Gill AL, Yap Y, Jayaprakash V, Sullivan MA, Gill SR. "Enterococcus faecalis enhances cell proliferation through hydrogen peroxide-mediated epidermal growth factor receptor activation." Infection and immunity.. 2012 Oct 0; 80(10):3545-58. Epub 2012 Jul 30.

Nikitkova AE, Haase EM, Vickerman MM, Gill SR, Scannapieco FA. "Response of fatty acid synthesis genes to the binding of human salivary amylase by Streptococcus gordonii." Applied and environmental microbiology.. 2012 Mar 0; 78(6):1865-75. Epub 2012 Jan 13.

Kos VN, Desjardins CA, Griggs A, Cerqueira G, Van Tonder A, Holden MT, Godfrey P, Palmer KL, Bodi K, Mongodin EF, Wortman J, Feldgarden M, Lawley T, Gill SR, Haas BJ, Birren B, Gilmore MS. "Comparative genomics of vancomycin-resistant Staphylococcus aureus strains and their positions within the clade most commonly associated with Methicillin-resistant S. aureus hospital-acquired infection in the United States." mBio.. 2012 3(3)Epub 2012 May 22.

Jayaprakash V, Reid M, Hatton E, Merzianu M, Rigual N, Marshall J, Gill S, Frustino J, Wilding G, Loree T, Popat S, Sullivan M. "Human papillomavirus types 16 and 18 in epithelial dysplasia of oral cavity and oropharynx: a meta-analysis, 1985-2010." Oral oncology.. 2011 Nov 0; 47(11):1048-54. Epub 2011 Aug 03.

Faden H, Gill S, Lesse A. "Impact of management and bacterial genomics on outcomes of Staphylococcus aureus bacteremia in children." Clinical pediatrics.. 2011 Oct 0; 50(10):929-35. Epub 2011 Jun 17.

Nair D, Memmi G, Hernandez D, Bard J, Beaume M, Gill S, Francois P, Cheung AL. "Whole-genome sequencing of Staphylococcus aureus strain RN4220, a key laboratory strain used in virulence research, identifies mutations that affect not only virulence factors but also the fitness of the strain." Journal of bacteriology.. 2011 May 0; 193(9):2332-5. Epub 2011 Mar 04.

Gill SR, McIntyre LM, Nelson CL, Remortel B, Rude T, Reller LB, Fowler VG. "Potential associations between severity of infection and the presence of virulence-associated genes in clinical strains of Staphylococcus aureus." PloS one.. 2011 Apr 26; 6(4):e18673. Epub 2011 Apr 26.

Glasner JD, Yang CH, Reverchon S, Hugouvieux-Cotte-Pattat N, Condemine G, Bohin JP, Van Gijsegem F, Yang S, Franza T, Expert D, Plunkett G, San Francisco MJ, Charkowski AO, Py B, Bell K, Rauscher L, Rodriguez-Palenzuela P, Toussaint A, Holeva MC, He SY, Douet V, Boccara M, Blanco C, Toth I, Anderson BD, Biehl BS, Mau B, Flynn SM, Barras F, Lindeberg M, Birch PR, Tsuyumu S, Shi X, Hibbing M, Yap MN, Carpentier M, Dassa E, Umehara M, Kim JF, Rusch M, Soni P, Mayhew GF, Fouts DE, Gill SR, Blattner FR, Keen NT, Perna NT. "Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937." Journal of bacteriology.. 2011 Apr 0; 193(8):2076-7. Epub 2011 Jan 07.

Madhusoodanan J, Seo KS, Remortel B, Park JY, Hwang SY, Fox LK, Park YH, Deobald CF, Wang D, Liu S, Daugherty SC, Gill AL, Bohach GA, Gill SR. "An Enterotoxin-Bearing Pathogenicity Island in Staphylococcus epidermidis." Journal of bacteriology.. 2011 Apr 0; 193(8):1854-62. Epub 2011 Feb 11.

Christie GE, Matthews AM, King DG, Lane KD, Olivarez NP, Tallent SM, Gill SR, Novick RP. "The complete genomes of Staphylococcus aureus bacteriophages 80 and 80?--implications for the specificity of SaPI mobilization." Virology.. 2010 Nov 25; 407(2):381-90. Epub 2010 Sep 25.

Gerrish RS, Gill SR. "Tailed pooled suppression subtractive hybridization (PSSH) adaptors do not alter efficiency." Antonie van Leeuwenhoek.. 2010 Nov 0; 98(4):573-9. Epub 2010 Jun 08.

Bik EM, Long CD, Armitage GC, Loomer P, Emerson J, Mongodin EF, Nelson KE, Gill SR, Fraser-Liggett CM, Relman DA. "Bacterial diversity in the oral cavity of 10 healthy individuals." The ISME journal.. 2010 Aug 0; 4(8):962-74. Epub 2010 Mar 25.

Qu J, Lesse AJ, Brauer AL, Cao J, Gill SR, Murphy TF. "Proteomic expression profiling of Haemophilus influenzae grown in pooled human sputum from adults with chronic obstructive pulmonary disease reveal antioxidant and stress responses." BMC microbiology.. 2010 Jun 1; 10:162. Epub 2010 Jun 01.

Gerrish RS, Gill AL, Fowler VG, Gill SR. "Development of pooled suppression subtractive hybridization to analyze the pangenome of Staphylococcus aureus." Journal of microbiological methods.. 2010 Apr 0; 81(1):56-60. Epub 2010 Feb 04.

Jayaprakash V, Sullivan M, Merzianu M, Rigual NR, Loree TR, Popat SR, Moysich KB, Ramananda S, Johnson T, Marshall JR, Hutson AD, Mang TS, Wilson BC, Gill SR, Frustino J, Bogaards A, Reid ME. "Autofluorescence-guided surveillance for oral cancer." Cancer prevention research.. 2009 Nov 0; 2(11):966-74.

Lin EA, Zhang XS, Levine SM, Gill SR, Falush D, Blaser MJ. "Natural transformation of helicobacter pylori involves the integration of short DNA fragments interrupted by gaps of variable size." PLoS pathogens.. 2009 Mar 0; 5(3):e1000337. Epub 2009 Mar 13.

Heo SM, Haase EM, Lesse AJ, Gill SR, Scannapieco FA. "Genetic relationships between respiratory pathogens isolated from dental plaque and bronchoalveolar lavage fluid from patients in the intensive care unit undergoing mechanical ventilation." Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.. 2008 Dec 15; 47(12):1562-70.

Jakubovics NS, Gill SR, Vickerman MM, Kolenbrander PE. "Role of hydrogen peroxide in competition and cooperation between Streptococcus gordonii and Actinomyces naeslundii." FEMS microbiology ecology.. 2008 Dec 0; 66(3):637-44. Epub 2008 Sep 09.

Adams MD, Goglin K, Molyneaux N, Hujer KM, Lavender H, Jamison JJ, MacDonald IJ, Martin KM, Russo T, Campagnari AA, Hujer AM, Bonomo RA, Gill SR. "Comparative genome sequence analysis of multidrug-resistant Acinetobacter baumannii." Journal of bacteriology.. 2008 Dec 0; 190(24):8053-64. Epub 2008 Oct 17.

Russo TA, Beanan JM, Olson R, MacDonald U, Luke NR, Gill SR, Campagnari AA. "Rat pneumonia and soft-tissue infection models for the study of Acinetobacter baumannii biology." Infection and immunity.. 2008 Aug 0; 76(8):3577-86. Epub 2008 Jun 09.

Jakubovics NS, Gill SR, Iobst SE, Vickerman MM, Kolenbrander PE. "Regulation of gene expression in a mixed-genus community: stabilized arginine biosynthesis in Streptococcus gordonii by coaggregation with Actinomyces naeslundii." Journal of bacteriology.. 2008 May 0; 190(10):3646-57. Epub 2008 Mar 21.

Vickerman MM, Iobst S, Jesionowski AM, Gill SR. "Genome-wide transcriptional changes in Streptococcus gordonii in response to competence signaling peptide." Journal of bacteriology.. 2007 Nov 0; 189(21):7799-807. Epub 2007 Aug 24.

Fowler VG, Nelson CL, McIntyre LM, Kreiswirth BN, Monk A, Archer GL, Federspiel J, Naidich S, Remortel B, Rude T, Brown P, Reller LB, Corey GR, Gill SR. "Potential associations between hematogenous complications and bacterial genotype in Staphylococcus aureus infection." The Journal of infectious diseases.. 2007 Sep 1; 196(5):738-47. Epub 2007 Jul 20.

Rasko DA, Rosovitz MJ, Økstad OA, Fouts DE, Jiang L, Cer RZ, Kolstø AB, Gill SR, Ravel J. "Complete sequence analysis of novel plasmids from emetic and periodontal Bacillus cereus isolates reveals a common evolutionary history among the B. cereus-group plasmids, including Bacillus anthracis pXO1." Journal of bacteriology.. 2007 Jan 0; 189(1):52-64. Epub 2006 Oct 13.

Vickerman MM, Brossard KA, Funk DB, Jesionowski AM, Gill SR. "Phylogenetic analysis of bacterial and archaeal species in symptomatic and asymptomatic endodontic infections." Journal of medical microbiology.. 2007 Jan 0; 56(Pt 1):110-8.

Gardete S, Wu SW, Gill S, Tomasz A. "Role of VraSR in antibiotic resistance and antibiotic-induced stress response in Staphylococcus aureus." Antimicrobial agents and chemotherapy.. 2006 Oct 0; 50(10):3424-34.

Pieper R, Gatlin-Bunai CL, Mongodin EF, Parmar PP, Huang ST, Clark DJ, Fleischmann RD, Gill SR, Peterson SN. "Comparative proteomic analysis of Staphylococcus aureus strains with differences in resistance to the cell wall-targeting antibiotic vancomycin." Proteomics.. 2006 Aug 0; 6(15):4246-58.

Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, Samuel BS, Gordon JI, Relman DA, Fraser-Liggett CM, Nelson KE. "Metagenomic analysis of the human distal gut microbiome." Science.. 2006 Jun 2; 312(5778):1355-9.

Fouts DE, Rasko DA, Cer RZ, Jiang L, Fedorova NB, Shvartsbeyn A, Vamathevan JJ, Tallon L, Althoff R, Arbogast TS, Fadrosh DW, Read TD, Gill SR. "Sequencing Bacillus anthracis typing phages gamma and cherry reveals a common ancestry." Journal of bacteriology.. 2006 May 0; 188(9):3402-8.

Diep BA, Gill SR, Chang RF, Phan TH, Chen JH, Davidson MG, Lin F, Lin J, Carleton HA, Mongodin EF, Sensabaugh GF, Perdreau-Remington F. "Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus." Lancet.. 2006 Mar 4; 367(9512):731-9.

Gatlin CL, Pieper R, Huang ST, Mongodin E, Gebregeorgis E, Parmar PP, Clark DJ, Alami H, Papazisi L, Fleischmann RD, Gill SR, Peterson SN. "Proteomic profiling of cell envelope-associated proteins from Staphylococcus aureus." Proteomics.. 2006 Mar 0; 6(5):1530-49.

Bik EM, Eckburg PB, Gill SR, Nelson KE, Purdom EA, Francois F, Perez-Perez G, Blaser MJ, Relman DA. "Molecular analysis of the bacterial microbiota in the human stomach." Proceedings of the National Academy of Sciences of the United States of America.. 2006 Jan 17; 103(3):732-7. Epub 2006 Jan 04.

Mongodin EF, Hance IR, Deboy RT, Gill SR, Daugherty S, Huber R, Fraser CM, Stetter K, Nelson KE. "Gene transfer and genome plasticity in Thermotoga maritima, a model hyperthermophilic species." Journal of bacteriology.. 2005 Jul 0; 187(14):4935-44.

Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, Sargent M, Gill SR, Nelson KE, Relman DA. "Diversity of the human intestinal microbial flora." Science.. 2005 Jun 10; 308(5728):1635-8. Epub 2005 Apr 14.

Gill SR, Fouts DE, Archer GL, Mongodin EF, Deboy RT, Ravel J, Paulsen IT, Kolonay JF, Brinkac L, Beanan M, Dodson RJ, Daugherty SC, Madupu R, Angiuoli SV, Durkin AS, Haft DH, Vamathevan J, Khouri H, Utterback T, Lee C, Dimitrov G, Jiang L, Qin H, Weidman J, Tran K, Kang K, Hance IR, Nelson KE, Fraser CM. "Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain." Journal of bacteriology.. 2005 Apr 0; 187(7):2426-38.

Nguyen TN, Ejaz AD, Brancieri MA, Mikula AM, Nelson KE, Gill SR, Noll KM. "Whole-genome expression profiling of Thermotoga maritima in response to growth on sugars in a chemostat." Journal of bacteriology.. 2004 Jul 0; 186(14):4824-8.

Nelson KE, Fouts DE, Mongodin EF, Ravel J, DeBoy RT, Kolonay JF, Rasko DA, Angiuoli SV, Gill SR, Paulsen IT, Peterson J, White O, Nelson WC, Nierman W, Beanan MJ, Brinkac LM, Daugherty SC, Dodson RJ, Durkin AS, Madupu R, Haft DH, Selengut J, Van Aken S, Khouri H, Fedorova N, Forberger H, Tran B, Kathariou S, Wonderling LD, Uhlich GA, Bayles DO, Luchansky JB, Fraser CM. "Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species." Nucleic acids research.. 2004 32(8):2386-95. Epub 2004 Apr 28.

Weigel LM, Clewell DB, Gill SR, Clark NC, McDougal LK, Flannagan SE, Kolonay JF, Shetty J, Killgore GE, Tenover FC. "Genetic analysis of a high-level vancomycin-resistant isolate of Staphylococcus aureus." Science.. 2003 Nov 28; 302(5650):1569-71.

Mongodin E, Finan J, Climo MW, Rosato A, Gill S, Archer GL. "Microarray transcription analysis of clinical Staphylococcus aureus isolates resistant to vancomycin." Journal of bacteriology.. 2003 Aug 0; 185(15):4638-43.

Weichhart T, Horky M, Söllner J, Gangl S, Henics T, Nagy E, Meinke A, von Gabain A, Fraser CM, Gill SR, Hafner M, von Ahsen U. "Functional selection of vaccine candidate peptides from Staphylococcus aureus whole-genome expression libraries in vitro." Infection and immunity.. 2003 Aug 0; 71(8):4633-41.

Henics T, Winkler B, Pfeifer U, Gill SR, Buschle M, von Gabain A, Meinke AL. "Small-fragment genomic libraries for the display of putative epitopes from clinically significant pathogens." BioTechniques.. 2003 Jul 0; 35(1):196-202, 204, 206 passim.

Read TD, Peterson SN, Tourasse N, Baillie LW, Paulsen IT, Nelson KE, Tettelin H, Fouts DE, Eisen JA, Gill SR, Holtzapple EK, Okstad OA, Helgason E, Rilstone J, Wu M, Kolonay JF, Beanan MJ, Dodson RJ, Brinkac LM, Gwinn M, DeBoy RT, Madpu R, Daugherty SC, Durkin AS, Haft DH, Nelson WC, Peterson JD, Pop M, Khouri HM, Radune D, Benton JL, Mahamoud Y, Jiang L, Hance IR, Weidman JF, Berry KJ, Plaut RD, Wolf AM, Watkins KL, Nierman WC, Hazen A, Cline R, Redmond C, Thwaite JE, White O, Salzberg SL, Thomason B, Friedlander AM, Koehler TM, Hanna PC, Kolstø AB, Fraser CM. "The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria." Nature.. 2003 May 1; 423(6935):81-6.

Paulsen IT, Banerjei L, Myers GS, Nelson KE, Seshadri R, Read TD, Fouts DE, Eisen JA, Gill SR, Heidelberg JF, Tettelin H, Dodson RJ, Umayam L, Brinkac L, Beanan M, Daugherty S, DeBoy RT, Durkin S, Kolonay J, Madupu R, Nelson W, Vamathevan J, Tran B, Upton J, Hansen T, Shetty J, Khouri H, Utterback T, Radune D, Ketchum KA, Dougherty BA, Fraser CM. "Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis." Science.. 2003 Mar 28; 299(5615):2071-4.

Nelson KE, Weinel C, Paulsen IT, Dodson RJ, Hilbert H, Martins dos Santos VA, Fouts DE, Gill SR, Pop M, Holmes M, Brinkac L, Beanan M, DeBoy RT, Daugherty S, Kolonay J, Madupu R, Nelson W, White O, Peterson J, Khouri H, Hance I, Chris Lee P, Holtzapple E, Scanlan D, Tran K, Moazzez A, Utterback T, Rizzo M, Lee K, Kosack D, Moestl D, Wedler H, Lauber J, Stjepandic D, Hoheisel J, Straetz M, Heim S, Kiewitz C, Eisen JA, Timmis KN, Düsterhöft A, Tümmler B, Fraser CM. "Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440." Environmental microbiology.. 2002 Dec 0; 4(12):799-808.

Paulsen IT, Seshadri R, Nelson KE, Eisen JA, Heidelberg JF, Read TD, Dodson RJ, Umayam L, Brinkac LM, Beanan MJ, Daugherty SC, Deboy RT, Durkin AS, Kolonay JF, Madupu R, Nelson WC, Ayodeji B, Kraul M, Shetty J, Malek J, Van Aken SE, Riedmuller S, Tettelin H, Gill SR, White O, Salzberg SL, Hoover DL, Lindler LE, Halling SM, Boyle SM, Fraser CM. "The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts." Proceedings of the National Academy of Sciences of the United States of America.. 2002 Oct 1; 99(20):13148-53. Epub 2002 Sep 23.

Etz H, Minh DB, Henics T, Dryla A, Winkler B, Triska C, Boyd AP, Söllner J, Schmidt W, von Ahsen U, Buschle M, Gill SR, Kolonay J, Khalak H, Fraser CM, von Gabain A, Nagy E, Meinke A. "Identification of in vivo expressed vaccine candidate antigens from Staphylococcus aureus." Proceedings of the National Academy of Sciences of the United States of America.. 2002 May 14; 99(10):6573-8. Epub 2002 May 07.

Read TD, Gill SR, Tettelin H, Dougherty BA. "Finding drug targets in microbial genomes." Drug discovery today.. 2001 Sep 1; 6(17):887-892.

Schmidt KA, Manna AC, Gill S, Cheung AL. "SarT, a repressor of alpha-hemolysin in Staphylococcus aureus." Infection and immunity.. 2001 Aug 0; 69(8):4749-58.

Fitzgerald JR, Sturdevant DE, Mackie SM, Gill SR, Musser JM. "Evolutionary genomics of Staphylococcus aureus: insights into the origin of methicillin-resistant strains and the toxic shock syndrome epidemic." Proceedings of the National Academy of Sciences of the United States of America.. 2001 Jul 17; 98(15):8821-6. Epub 2001 Jul 10.

Heidelberg JF, Eisen JA, Nelson WC, Clayton RA, Gwinn ML, Dodson RJ, Haft DH, Hickey EK, Peterson JD, Umayam L, Gill SR, Nelson KE, Read TD, Tettelin H, Richardson D, Ermolaeva MD, Vamathevan J, Bass S, Qin H, Dragoi I, Sellers P, McDonald L, Utterback T, Fleishmann RD, Nierman WC, White O, Salzberg SL, Smith HO, Colwell RR, Mekalanos JJ, Venter JC, Fraser CM. "DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae." Nature.. 2000 Aug 3; 406(6795):477-83.

Read TD, Brunham RC, Shen C, Gill SR, Heidelberg JF, White O, Hickey EK, Peterson J, Utterback T, Berry K, Bass S, Linher K, Weidman J, Khouri H, Craven B, Bowman C, Dodson R, Gwinn M, Nelson W, DeBoy R, Kolonay J, McClarty G, Salzberg SL, Eisen J, Fraser CM. "Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39." Nucleic acids research.. 2000 Mar 15; 28(6):1397-406.

Hutchison CA, Peterson SN, Gill SR, Cline RT, White O, Fraser CM, Smith HO, Venter JC. "Global transposon mutagenesis and a minimal Mycoplasma genome." Science.. 1999 Dec 10; 286(5447):2165-9.

Valetti C, Wetzel DM, Schrader M, Hasbani MJ, Gill SR, Kreis TE, Schroer TA. "Role of dynactin in endocytic traffic: effects of dynamitin overexpression and colocalization with CLIP-170." Molecular biology of the cell.. 1999 Dec 0; 10(12):4107-20.

Eckley DM, Gill SR, Melkonian KA, Bingham JB, Goodson HV, Heuser JE, Schroer TA. "Analysis of dynactin subcomplexes reveals a novel actin-related protein associated with the arp1 minifilament pointed end." The Journal of cell biology.. 1999 Oct 18; 147(2):307-20.

Quintyne NJ, Gill SR, Eckley DM, Crego CL, Compton DA, Schroer TA. "Dynactin is required for microtubule anchoring at centrosomes." The Journal of cell biology.. 1999 Oct 18; 147(2):321-34.

Nelson KE, Clayton RA, Gill SR, Gwinn ML, Dodson RJ, Haft DH, Hickey EK, Peterson JD, Nelson WC, Ketchum KA, McDonald L, Utterback TR, Malek JA, Linher KD, Garrett MM, Stewart AM, Cotton MD, Pratt MS, Phillips CA, Richardson D, Heidelberg J, Sutton GG, Fleischmann RD, Eisen JA, White O, Salzberg SL, Smith HO, Venter JC, Fraser CM. "Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima." Nature.. 1999 May 27; 399(6734):323-9.

De Lencastre H, Wu SW, Pinho MG, Ludovice AM, Filipe S, Gardete S, Sobral R, Gill S, Chung M, Tomasz A. "Antibiotic resistance as a stress response: complete sequencing of a large number of chromosomal loci in Staphylococcus aureus strain COL that impact on the expression of resistance to methicillin." Microbial drug resistance (Larchmont, N.Y.). 1999 5(3):163-75.

Klenk HP, Clayton RA, Tomb JF, White O, Nelson KE, Ketchum KA, Dodson RJ, Gwinn M, Hickey EK, Peterson JD, Richardson DL, Kerlavage AR, Graham DE, Kyrpides NC, Fleischmann RD, Quackenbush J, Lee NH, Sutton GG, Gill S, Kirkness EF, Dougherty BA, McKenney K, Adams MD, Loftus B, Peterson S, Reich CI, McNeil LK, Badger JH, Glodek A, Zhou L, Overbeek R, Gocayne JD, Weidman JF, McDonald L, Utterback T, Cotton MD, Spriggs T, Artiach P, Kaine BP, Sykes SM, Sadow PW, D'Andrea KP, Bowman C, Fujii C, Garland SA, Mason TM, Olsen GJ, Fraser CM, Smith HO, Woese CR, Venter JC. "The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus." Nature.. 1997 Nov 27; 390(6658):364-70.

Tomb JF, White O, Kerlavage AR, Clayton RA, Sutton GG, Fleischmann RD, Ketchum KA, Klenk HP, Gill S, Dougherty BA, Nelson K, Quackenbush J, Zhou L, Kirkness EF, Peterson S, Loftus B, Richardson D, Dodson R, Khalak HG, Glodek A, McKenney K, Fitzegerald LM, Lee N, Adams MD, Hickey EK, Berg DE, Gocayne JD, Utterback TR, Peterson JD, Kelley JM, Cotton MD, Weidman JM, Fujii C, Bowman C, Watthey L, Wallin E, Hayes WS, Borodovsky M, Karp PD, Smith HO, Fraser CM, Venter JC. "The complete genome sequence of the gastric pathogen Helicobacter pylori." Nature.. 1997 Aug 7; 388(6642):539-47.

Gaglio T, Saredi A, Bingham JB, Hasbani MJ, Gill SR, Schroer TA, Compton DA. "Opposing motor activities are required for the organization of the mammalian mitotic spindle pole." The Journal of cell biology.. 1996 Oct 0; 135(2):399-414.

Schroer TA, Bingham JB, Gill SR. "Actin-related protein 1 and cytoplasmic dynein-based motility - what's the connection?" Trends in cell biology. 1996 Jun 0; 6(6):212-5.

Schafer DA, Gill SR, Cooper JA, Heuser JE, Schroer TA. "Ultrastructural analysis of the dynactin complex: an actin-related protein is a component of a filament that resembles F-actin." The Journal of cell biology.. 1994 Jul 0; 126(2):403-12.

Gill SR, Cleveland DW, Schroer TA. "Characterization of DLC-A and DLC-B, two families of cytoplasmic dynein light chain subunits." Molecular biology of the cell.. 1994 Jun 0; 5(6):645-54.

Smeltzer MS, Gill SR, Iandolo JJ. "Localization of a chromosomal mutation affecting expression of extracellular lipase in Staphylococcus aureus." Journal of bacteriology.. 1992 Jun 0; 174(12):4000-6.

Gill SR, Schroer TA, Szilak I, Steuer ER, Sheetz MP, Cleveland DW. "Dynactin, a conserved, ubiquitously expressed component of an activator of vesicle motility mediated by cytoplasmic dynein." The Journal of cell biology.. 1991 Dec 0; 115(6):1639-50.

Cleveland DW, Monteiro MJ, Wong PC, Gill SR, Gearhart JD, Hoffman PN. "Involvement of neurofilaments in the radial growth of axons." Journal of cell science. Supplement. 1991 15:85-95.

Gill SR, Wong PC, Monteiro MJ, Cleveland DW. "Assembly properties of dominant and recessive mutations in the small mouse neurofilament (NF-L) subunit." The Journal of cell biology.. 1990 Nov 0; 111(5 Pt 1):2005-19.