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Tongtong Wu, Ph.D.


Showing all 49 journal articles & 1 books available

Journal Articles

Xiao J, Meyerowitz C, Ragusa P, Funkhouser K, Lischka T, Mendez Chagoya LA, Al Jallad N, Wu TT, Fiscella K, Ivie E, Strange M, Collins J, Kopycka-Kedzierawsk DT. "Assess an innovative mDentistry eHygiene model amid the COVID-19 pandemic in the National Dental Practice-Based Research Network: Protocol for design, implementation, and usability testing." JMIR research protocols. 2021 Sep 22; Epub 2021 Sep 22.

Xiao J, Luo J, Ly-Mapes O, Wu TT, Dye T, Al Jallad N, Hao P, Ruan J, Bullock S, Fiscella K. "Assess A Smartphone App (AICaries) that uses artificial intelligence to detect dental caries in children and provide interactive oral health education: Protocol for design and usability testing." JMIR research protocols. 2021 Sep 14; Epub 2021 Sep 14.

Jang H, Patoine A, Wu TT, Castillo DA, Xiao J. "Oral microflora and pregnancy: a systematic review and meta-analysis." Scientific reports.. 2021 Aug 19; 11(1):16870. Epub 2021 Aug 19.

Jang H, Al Jallad N, Wu TT, Zeng Y, Fadaak A, Malmstrom H, Fiscella K, Xiao J. "Changes in , and oral health conditions following Prenatal Total Oral Rehabilitation among underserved pregnant women." Heliyon.. 2021 Aug 0; 7(8):e07871. Epub 2021 Aug 26.

Krieger NS, Asplin J, Granja I, Chen L, Spataru D, Wu TT, Grynpas M, Bushinsky DA. "Chlorthalidone with potassium citrate decreases calcium oxalate stones and increases bone quality in genetic hypercalciuric stone-forming rats." Kidney international.. 2021 Jan 5; Epub 2021 Jan 05.

Wu TT, Xiao J, Sohn MB, Fiscella KA, Gilbert C, Grier A, Gill AL, Gill SR. "Machine Learning Approach Identified Multi-Platform Factors for Caries Prediction in Child-Mother Dyads." Frontiers in cellular and infection microbiology.. 2021 11:727630. Epub 2021 Aug 19.

Ramchandren S, Wu TT, Finkel RS, Siskind CE, Feely SME, Burns J, Reilly MM, Estilow T, Shy ME, . "Development and Validation of the Pediatric CMT Quality of Life Outcome Measure." Annals of neurology.. 2020 Nov 22; Epub 2020 Nov 22.

Koebnick C, Saksvig B, Li X, Sidell M, Wu TT, Young DR. "The Accuracy of Self-Reported Body Weight Is High but Dependent on Recent Weight Change and Negative Affect in Teenage Girls." International journal of environmental research and public health.. 2020 Nov 6; 17(21)Epub 2020 Nov 06.

Ren J, Ramirez GA, Proctor AR, Wu TT, Benoit DSW, Choe R. "Spatial frequency domain imaging for the longitudinal monitoring of vascularization during mouse femoral graft healing." Biomedical optics express.. 2020 Oct 1; 11(10):5442-5455. Epub 2020 Sep 03.

Xiao J, Fogarty C, Wu TT, Alkhers N, Zeng Y, Thomas M, Youssef M, Wang L, Cowen L, Abdelsalam H, Nikitkova A. "Oral health and Candida carriage in socioeconomically disadvantaged US pregnant women." BMC pregnancy and childbirth.. 2019 Dec 5; 19(1):480. Epub 2019 Dec 05.

Krieger NS, Asplin JR, Granja I, Ramos FM, Flotteron C, Chen L, Wu TT, Grynpas MD, Bushinsky DA. "Chlorthalidone Is Superior to Potassium Citrate in Reducing Calcium Phosphate Stones and Increasing Bone Quality in Hypercalciuric Stone-Forming Rats." Journal of the American Society of Nephrology : JASN.. 2019 Jul 0; 30(7):1163-1173. Epub 2019 May 17.

Wang D, Wu TT, Zhao Y. "Penalized Empirical Likelihood for the Sparse Cox Regression Model." Journal of statistical planning and inference.. 2019 Jul 0; 201:71-85. Epub 2018 Dec 15.

Chen W, Fitzpatrick J, Monroy-Trujillo JM, Sozio SM, Jaar BG, Estrella MM, Wu TT, Melamed ML, Parekh RS, Bushinsky DA. "Diabetes Mellitus Modifies the Associations of Serum Magnesium Concentration With Arterial Calcification and Stiffness in Incident Hemodialysis Patients." Kidney international reports.. 2019 Jun 0; 4(6):806-813. Epub 2019 Mar 13.

Meng Y, Wu T, Billings R, Kopycka-Kedzierawski DT, Xiao J. "Human genes influence the interaction between Streptococcus mutans and host caries susceptibility: a genome-wide association study in children with primary dentition." International journal of oral science.. 2019 May 30; 11(2):19. Epub 2019 May 30.

Konkel B, Lavin C, Wu TT, Anderson E, Iwamoto A, Rashid H, Gaitian B, Boone J, Cooper M, Abrams P, Gilbert A, Tang Q, Levi M, Fujimoto JG, Andrews P, Chen Y. "Fully automated analysis of OCT imaging of human kidneys for prediction of post-transplant function." Biomedical optics express.. 2019 Apr 1; 10(4):1794-1821. Epub 2019 Mar 13.

Ciminelli JT, Love T, Wu TT. "Social Network Spatial Model." . 2019 Mar 0; 29:129-144. Epub 2018 Nov 20.

Young DR, Sidell MA, Koebnick C, Saksvig BI, Mohan Y, Cohen DA, Wu TT. "Longitudinal Sedentary Time Among Females Aged 17 to 23 Years." American journal of preventive medicine.. 2019 Feb 15; Epub 2019 Feb 15.

Xiao J, Alkhers N, Kopycka-Kedzierawski DT, Billings RJ, Wu TT, Castillo DA, Rasubala L, Malmstrom H, Ren Y, Eliav E. "Prenatal Oral Health Care and Early Childhood Caries Prevention: A Systematic Review and Meta-Analysis." Caries research.. 2019 Jan 10; :1-11. Epub 2019 Jan 10.

Lee CY, Robinson DA, Johnson CA, Zhang Y, Wong J, Joshi DJ, Wu TT, Knight PA. "A Randomized Controlled Trial of Liposomal Bupivacaine Parasternal Intercostal Block for Sternotomy." The Annals of thoracic surgery.. 2019 Jan 0; 107(1):128-134. Epub 2018 Aug 28.

Chen W, Anokhina V, Dieudonne G, Abramowitz MK, Kashyap R, Yan C, Wu TT, de Mesy Bentley KL, Miller BL, Bushinsky DA. "Patients with advanced chronic kidney disease and vascular calcification have a large hydrodynamic radius of secondary calciprotein particles." Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association.. 2018 May 16; Epub 2018 May 16.

Groth SW, LaLonde A, Wu T, Fernandez ID. "Obesity candidate genes, gestational weight gain, and body weight changes in pregnant women." Nutrition.. 2018 Apr 0; 48:61-66. Epub 2017 Dec 02.

Xiao J, Huang X, Alkhers N, Alzamil H, Alzoubi S, Wu TT, Castillo DA, Campbell F, Davis J, Herzog K, Billings R, Kopycka-Kedzierawski DT, Hajishengallis E, Koo H. "Candida albicans and Early Childhood Caries: A Systematic Review and Meta-Analysis." Caries research.. 2018 52(1-2):102-112. Epub 2017 Dec 21.

Wang B, Wang HW, Guo H, Anderson E, Tang Q, Wu T, Falola R, Smith T, Andrews PM, Chen Y. "Optical coherence tomography and computer-aided diagnosis of a murine model of chronic kidney disease." Journal of biomedical optics.. 2017 Dec 0; 22(12):1-11.

Abu-Farsakh S, Wu T, Lalonde A, Sun J, Zhou Z. "High expression of Claudin-2 in esophageal carcinoma and precancerous lesions is significantly associated with the bile salt receptors VDR and TGR5." BMC gastroenterology. 2017 Feb 17; 17(1):33. Epub 2017 Feb 17.

Jaworski JP, Bryk P, Brower Z, Zheng B, Hessell AJ, Rosenberg AF, Wu TT, Sanz I, Keefer MC, Haigwood NL, Kobie JJ. "Pre-existing neutralizing antibody mitigates B cell dysregulation and enhances the Env-specific antibody response in SHIV-infected rhesus macaques." PloS one.. 2017 12(2):e0172524. Epub 2017 Feb 21.

Pang C, LaLonde A, Godfrey TE, Que J, Sun J, Wu TT, Zhou Z. "Bile salt receptor TGR5 is highly expressed in esophageal adenocarcinoma and precancerous lesions with significantly worse overall survival and gender differences." Clinical and experimental gastroenterology. 2017 10:29-37. Epub 2017 Feb 07.

Meng Y, Groth S, Quinn JR, Bisognano J, Wu TT. "An Exploration of Gene-Gene Interactions and Their Effects on Hypertension." International journal of genomics.. 2017 2017:7208318. Epub 2017 May 31.

Tang Q, Wang J, Frank A, Lin J, Li Z, Chen CW, Jin L, Wu T, Greenwald BD, Mashimo H, Chen Y. "Depth-resolved imaging of colon tumor using optical coherence tomography and fluorescence laminar optical tomography." Biomedical optics express.. 2016 Dec 1; 7(12):5218-5232. Epub 2016 Nov 21.

Fang HB, Wu TT, Rapoport AP, Tan M. "Survival analysis with functional covariates for partial follow-up studies." Statistical methods in medical research.. 2016 Dec 0; 25(6):2405-2419. Epub 2014 Feb 24.

Choy B, LaLonde A, Que J, Wu T, Zhou Z. "MCM4 and MCM7, potential novel proliferation markers, significantly correlated with Ki-67, Bmi1, and cyclin E expression in esophageal adenocarcinoma, squamous cell carcinoma, and precancerous lesions." Human pathology.. 2016 Nov 0; 57:126-135. Epub 2016 Jul 29.

Ramirez G, Proctor AR, Jung KW, Wu TT, Han S, Adams RR, Ren J, Byun DK, Madden KS, Brown EB, Foster TH, Farzam P, Durduran T, Choe R. "Chemotherapeutic drug-specific alteration of microvascular blood flow in murine breast cancer as measured by diffuse correlation spectroscopy." Biomedical optics express.. 2016 Sep 1; 7(9):3610-3630. Epub 2016 Aug 24.

Wu TT, Lange K. "Matrix Completion Discriminant Analysis." Computational statistics & data analysis.. 2015 Dec 0; 92:115-125.

Wu TT, Li G, Tang C. "Empirical Likelihood for Censored Linear Regression and Variable Selection." Scandinavian journal of statistics, theory and applications.. 2015 Sep 0; 42(3):798-812. Epub 2015 Jan 27.

Huber AR, Tan D, Sun J, Dean D, Wu T, Zhou Z. "High expression of carbonic anhydrase IX is significantly associated with glandular lesions in gastroesophageal junction and with tumorigenesis markers BMI1, MCM4 and MCM7." BMC gastroenterology. 2015 Jul 9; 15:80. Epub 2015 Jul 09.

Young D, Saksvig BI, Wu TT, Zook K, Li X, Champaloux S, Grieser M, Lee S, Treuth MS. "Multilevel correlates of physical activity for early, mid, and late adolescent girls." Journal of physical activity & health.. 2014 Jul 0; 11(5):950-60. Epub 2013 May 13.

Zook KR, Saksvig BI, Wu TT, Young DR. "Physical activity trajectories and multilevel factors among adolescent girls." The Journal of adolescent health : official publication of the Society for Adolescent Medicine.. 2014 Jan 0; 54(1):74-80. Epub 2013 Aug 29.

Chen S, Grant E, Wu TT, Bowman FD. "Statistical Learning Methods for Longitudinal High-dimensional Data." Wiley interdisciplinary reviews. Computational statistics.. 2014 Jan 0; 6(1):10-18.

Gong H, Wu TT, Clarke EM. "Pathway-gene identification for pancreatic cancer survival via doubly regularized Cox regression." BMC systems biology.. 2014 8 Suppl 1:S3. Epub 2014 Jan 24.

Morrison S, Shenassa ED, Mendola P, Wu T, Schoendorf K. "Allostatic load may not be associated with chronic stress in pregnant women, NHANES 1999-2006." Annals of epidemiology.. 2013 May 0; 23(5):294-7.

Wu TT, Wu Y. "Nonlinear Vertex Discriminant Analysis with Reproducing Kernels." Statistical analysis and data mining.. 2012 Apr 0; 5(2):167-176.

Wu TT, Gong H, Clarke EM. "A transcriptome analysis by lasso penalized Cox regression for pancreatic cancer survival." Journal of bioinformatics and computational biology.. 2011 Dec 0; 9 Suppl 1:63-73.


Hamza M, Wang XM, Wu T, Brahim JS, Rowan JS, Dionne RA. "Nitric oxide is negatively correlated to pain during acute inflammation." Molecular pain. 2010 Sep 15; 6:55. Epub 2010 Sep 15.

Saligan LN, Levy-Clarke G, Wu T, Faia LJ, Wroblewski K, Yeh S, Nussenblatt RB, Sen HN. "Quality of life in sarcoidosis: comparing the impact of ocular and non-ocular involvement of the disease." Ophthalmic epidemiology.. 2010 Aug 0; 17(4):217-24.

Wu TT, Chen YF, Hastie T, Sobel E, Lange K. "Genome-wide association analysis by lasso penalized logistic regression." Bioinformatics.. 2009 Mar 15; 25(6):714-21. Epub 2009 Jan 28.

Wu T, Sun W, Yuan S, Chen CH, Li KC. "A method for analyzing censored survival phenotype with gene expression data." BMC bioinformatics.. 2008 Oct 6; 9:417. Epub 2008 Oct 06.

Park CC, Ahn S, Bloom JS, Lin A, Wang RT, Wu T, Sekar A, Khan AH, Farr CJ, Lusis AJ, Leahy RM, Lange K, Smith DJ. "Fine mapping of regulatory loci for mammalian gene expression using radiation hybrids." Nature genetics.. 2008 Apr 0; 40(4):421-9. Epub 2008 Mar 23.

Liu H, Miller LG, Golin CE, Hays RD, Wu T, Wenger NS, Kaplan AH. "Repeated measures analyses of dose timing of antiretroviral medication and its relationship to HIV virologic outcomes." Statistics in medicine.. 2007 Feb 28; 26(5):991-1007.

Liu H, Miller LG, Hays RD, Golin CE, Wu T, Wenger NS, Kaplan AH. "Repeated measures longitudinal analyses of HIV virologic response as a function of percent adherence, dose timing, genotypic sensitivity, and other factors." Journal of acquired immune deficiency syndromes : JAIDS.. 2006 Mar 0; 41(3):315-22.

Books & Chapters

Chapter Title: Statistical Analysis of High-Dimensional Data for Pancreatic Cancer
Book Title: Molecular Diagnostics and Treatment of Pancreatic Cancer: Systems and Network Biology Approaches
Author List: Gong, H.*, Wu, T.T.*$, and Clarke, E. (*: joint first authors) ($: corresponding author)
Published By: Elsevier Academic Press2014