Publications - Kim Lab - University of Rochester Medical Center

URMC / Labs / Kim Lab / Publications

1. Gao Q
2. Kim M
3. von Arx D
4. Zhang E
5. Zhang X
6. Ye H
7. Vogt C
8. Ehmke C
9. Corsino D
10. Catania F
11. Münzenrieder N
12. Magno M
13. Cantarella G
14. Nelson BJ
15. Pané S
Soft magnetic microrobots with remote sensing and communication capabilities.; Nature communications; Vol 16(1), pp. 10489. 2025 Nov 25.
1. Kim M
2. Youn YC
3. Won Y
4. Choi H
5. Shim Y
6. Ryoo N
7. Jeong HT
8. Yun G
9. Lee H
10. Kim S
Domain generalization for voice-based cognitive impairment detection.; BMC medical informatics and decision making. 2025 Nov 24.
1. Kim MS
2. Kim P
3. Yu Sin S
4. Kim JW
5. Park CW
6. Yoo SH
7. Kim JG
Complete mitochondrial genome and phylogenetic analysis of Luciogobius parvulus (Synder, 1909) (Teleostei, Gobiidae) from Korea.; Mitochondrial DNA. Part B, Resources; Vol 10(12), pp. 1180-1184. 2025 Nov 15.
1. Kwon H
2. Kwon S
3. Park S
4. Lee S
5. Kim J
6. Pané S
7. Kim M
8. Lee HT
Empirical Study of Magnetically Induced Modulus and Contact Area Changes in a Switchable Adhesive.; ACS applied materials & interfaces. 2025 Nov 13.
1. Khandelwal H
2. Mutyala S
3. Kim M
4. Kong DS
5. Kim C
6. Kim JR
In situ monitoring of intracellular NADP+/NADPH state: Engineered E. coli redox biosensor for carbon metabolism and toxicant detection.; Biosensors & bioelectronics; Vol 294, pp. 118213. 2025 Nov 10.
1. Makovska A
2. Walinda E
3. Aoyama R
4. Kim M
5. Morimoto D
A minimal slow dialysis method for refolding inclusion body proteins: Structural application to NEDD8 and its Q40E mutant.; Analytical biochemistry; Vol 709, pp. 116009. 2025 Nov 08.
1. Boscenco S
2. Tait-Mulder J
3. Kim M
4. Tang C
5. Park T
6. McNulty F
7. Lilla S
8. Zanivan S
9. Huerta-Uribe A
10. Nalbant B
11. Zucker M
12. Sumpton D
13. Monteuuis G
14. Jackson CB
15. Wei W
16. Chinnery PF
17. Chaligne R
18. Lareau CA
19. Reznik E
20. Gammage PA
Functionally dominant hotspot mutations of mitochondrial ribosomal RNA genes in cancer.; Nature genetics. 2025 Nov 03.
1. Hwang J
2. Youm C
3. Park H
4. Kim B
5. Choi H
6. Kim M
7. Cheon SM
Multidimensional factors of health-related quality of life in parkinson's disease using ensemble learning and network analysis.; Scientific reports; Vol 15(1), pp. 36786. 2025 Oct 21.
1. Kim Y
2. Kim M
3. Park S
4. Nam J
5. Shin J
6. Min HS
7. Kang G
8. Jung H
Dissolving microneedle-based epicutaneous immunotherapy for peanut allergy using hyaluronic acid via a film-gluing method.; Carbohydrate polymers; Vol 370, pp. 124398. 2025 Sep 12.
1. Ryan AT
2. Kim M
Microvilli's grip on T cell development.; Proceedings of the National Academy of Sciences of the United States of America; Vol 122(35), pp. e2518069122. 2025 Aug 25.
1. Murphy JD
2. Hannon G
3. Mills BN
4. Hughson AL
5. Uccello TP
6. Gavras NW
7. Ye J
8. Belt BA
9. Lesch ML
10. Eckl SL
11. Barr EB
12. Lord EM
13. Kim M
14. Qiu H
15. Linehan DC
16. Gerber SA
Improving SBRT by re-wiring immunosuppressive neutrophils in murine pancreatic ductal adenocarcinoma.; International journal of radiation oncology, biology, physics. 2025 Jul 01.
1. Ha ES
2. Park H
3. Jeong JS
4. Lee SK
5. Kang HT
6. Baek IH
7. Kim MS
Effect of Process Parameters on Nano-Microparticle Formation During Supercritical Antisolvent Process Using Mixed Solvent: Application for Enhanced Dissolution and Oral Bioavailability of Telmisartan Through Particle-Size Control Based on Experimental Design.; Pharmaceutics; Vol 16(12). 2024 Nov 24.
1. Knudsen-Clark AM
2. Mwangi D
3. Cazarin J
4. Morris K
5. Baker C
6. Hablitz LM
7. McCall MN
8. Kim M
9. Altman BJ
Circadian rhythms of macrophages are altered by the acidic tumor microenvironment.; EMBO reports. 2024 Oct 16.
1. Dahal A
2. Hong Y
3. Mathew JS
4. Geber A
5. Eckl S
6. Renner S
7. Sailer CJ
8. Ryan AT
9. Mir S
10. Lim K
11. Linehan DC
12. Gerber SA
13. Kim M
Platelet-activating factor (PAF) promotes immunosuppressive neutrophil differentiation within tumors.; Proceedings of the National Academy of Sciences of the United States of America; Vol 121(35), pp. e2406748121. 2024 Aug 23.
1. Ryan AT
2. Dahal A
3. Mir S
4. Kim M
5. Lim K
Real-Time In Vitro Migration Assay for Primary Murine CD8+ T Cells.; Journal of visualized experiments : JoVE. 2024 May 24.
1. Ciambella C
2. Witt H
3. Dickinson CM
4. Smith ML
5. Coburn N
6. Messina N
7. Heffernan DS
8. Kim M
9. Reichner JS
Inhibition of Integrin VLA-3 and Tetraspanin CD151 Protects Against Neutrophil-Mediated Endothelial Damage.; Shock (Augusta, Ga.). 2024 May 23.
1. Ryan AT
2. Kim M
3. Lim K
Immune Cell Migration to Cancer.; Cells; Vol 13(10). 2024 May 16.
1. Hong SC
2. Hong CR
3. Kim M
4. Kang YJ
5. Jung YH
6. Park KM
7. Choi J
8. Chang PS
Process optimization for microfluidic preparation of liposomes using food-grade components.; Food chemistry; Vol 451, pp. 139437. 2024 Apr 24.
1. Lin MY
2. Nam E
3. Shih RM
4. Shafer A
5. Bouren A
6. Ayala Ceja M
7. Harris C
8. Khericha M
9. Vo KH
10. Kim M
11. Tseng CH
12. Chen YY
Self-regulating CAR-T cells modulate cytokine release syndrome in adoptive T-cell therapy.; The Journal of experimental medicine; Vol 221(6). 2024 Apr 12.
1. Li C
2. Ture SK
3. Nieves-Lopez B
4. Blick-Nitko SK
5. Maurya P
6. Livada AC
7. Stahl TJ
8. Kim M
9. Pietropaoli AP
10. Morrell CN
Thrombocytopenia Independently Leads to Changes in Monocyte Immune Function.; Circulation research. 2024 Mar 08.
1. Knudsen-Clark AM
2. Mwangi D
3. Cazarin J
4. Hablitz LM
5. Kim M
6. Altman BJ
Circadian rhythms of macrophages are altered by the acidic pH of the tumor microenvironment.; bioRxiv : the preprint server for biology. 2024 Feb 16.
1. Park S
2. Colville MJ
3. Paek JH
4. Shurer CR
5. Singh A
6. Secor EJ
7. Sailer CJ
8. Huang LT
9. Kuo JC
10. Goudge MC
11. Su J
12. Kim M
13. DeLisa MP
14. Neelamegham S
15. Lammerding J
16. Zipfel WR
17. Fischbach C
18. Reesink HL
19. Paszek MJ
Immunoengineering can overcome the glycocalyx armour of cancer cells.; Nature materials. 2024 Feb 15.
1. Sailer CJ
2. Hong Y
3. Dahal A
4. Ryan AT
5. Mir S
6. Gerber SA
7. Reagan PM
8. Kim M
PD-1Hi CAR-T cells provide superior protection against solid tumors.; Frontiers in immunology; Vol 14, pp. 1187850. 2023 Jun 14.
1. Waugh RE
2. Lomakina E
3. Amitrano A
4. Kim M
Activation effects on the physical characteristics of T lymphocytes.; Frontiers in bioengineering and biotechnology; Vol 11, pp. 1175570. 2023 May 15.
1. Li C
2. Ture SK
3. Nieves-Lopez B
4. Blick-Nitko SK
5. Maurya P
6. Livada AC
7. Stahl TJ
8. Kim M
9. Pietropaoli AP
10. Morrell CN
Thrombocytopenia Independently Leads to Monocyte Immune Dysfunction.; bioRxiv : the preprint server for biology. 2023 May 12.
1. Hong Y
2. Walling BL
3. Kim HR
4. Serratelli WS
5. Lozada JR
6. Sailer CJ
7. Amitrano AM
8. Lim K
9. Mongre RK
10. Kim KD
11. Capece T
12. Lomakina EB
13. Reilly NS
14. Vo K
15. Gerber SA
16. Fan TC
17. Yu AL
18. Oakes PW
19. Waugh RE
20. Jun CD
21. Reagan PM
22. Kim M
ST3GAL1 and βII-spectrin pathways control CAR T cell migration to target tumors.; Nature immunology. 2023 Apr 17.
1. Amitrano AM
2. Kim M
Metabolic Challenges in Anticancer CD8 T Cell Functions.; Immune network; Vol 23(1), pp. e9. 2023 Jan 27.
1. Wang MS
2. Hu Y
3. Sanchez EE
4. Xie X
5. Roy NH
6. de Jesus M
7. Winer BY
8. Zale EA
9. Jin W
10. Sachar C
11. Lee JH
12. Hong Y
13. Kim M
14. Kam LC
15. Salaita K
16. Huse M
Author Correction: Mechanically active integrins target lytic secretion at the immune synapse to facilitate cellular cytotoxicity.; Nature communications; Vol 14(1), pp. 8401. 2023 Jan 18.
1. Xie C
2. Ren Y
3. Weeks J
4. Rainbolt J
5. Mark Kenney H
6. Xue T
7. Allen F
8. Shu Y
9. Tay AJH
10. Lekkala S
11. Yeh SA
12. Muthukrishnan G
13. Gill AL
14. Gill SR
15. Kim M
16. Kates SL
17. Schwarz EM
Longitudinal Intravital Imaging of the Bone Marrow (LIMB) for Analysis of the Race for the Surface in a Murine Osteomyelitis Model.; Journal of orthopaedic research : official publication of the Orthopaedic Research Society. 2023 Jan 09.
1. Trzeciak A
2. Mongre RK
3. Kim MR
4. Lim K
5. Madero RA
6. Parkhurst CN
7. Pietropaoli AP
8. Kim M
Neutrophil heterogeneity in complement C1q expression associated with sepsis mortality.; Frontiers in immunology; Vol 13, pp. 965305. 2022 Aug 02.
1. Wang MS
2. Hu Y
3. Sanchez EE
4. Xie X
5. Roy NH
6. de Jesus M
7. Winer BY
8. Zale EA
9. Jin W
10. Sachar C
11. Lee JH
12. Hong Y
13. Kim M
14. Kam LC
15. Salaita K
16. Huse M
Mechanically active integrins target lytic secretion at the immune synapse to facilitate cellular cytotoxicity.; Nature communications; Vol 13(1). 2022 Jun 09.
1. Kim M
2. Li S
3. Kong DS
4. Song YE
5. Park SY
6. Kim HI
7. Jae J
8. Chung I
9. Kim JR
Polydopamine/polypyrrole-modified graphite felt enhances biocompatibility for electroactive bacteria and power density of microbial fuel cell.; Chemosphere. 2022 Jan 28.
1. Veazey JM
2. Wong GS
3. Eliseeva SI
4. Smyth TR
5. Chapman TJ
6. Lim K
7. Kim M
8. Georas SN
Protein kinase D3 promotes neutrophil migration during viral infection.; Immunology and cell biology. 2022 Jan 01.
1. Ghosh SK
2. Park J
3. Na S
4. Kim MP
5. Ko H
A Fully Biodegradable Ferroelectric Skin Sensor from Edible Porcine Skin Gelatine.; Advanced science (Weinheim, Baden-Wurttemberg, Germany); Vol 8(13). 2021 Jul.
1. Qin SS
2. Han BJ
3. Williams A
4. Jackson KM
5. Jewell R
6. Chacon AC
7. Lord EM
8. Linehan DC
9. Kim M
10. Reuben A
11. Gerber SA
12. Prieto PA
Intertumoral Genetic Heterogeneity Generates Distinct Tumor Microenvironments in a Novel Murine Synchronous Melanoma Model.; Cancers; Vol 13(10). 2021 May 11.
1. Fowell DJ
2. Kim M
The spatio-temporal control of effector T cell migration.; Nature reviews. Immunology. 2021 Feb 24.
1. Amitrano AM
2. Berry BJ
3. Lim K
4. Kim KD
5. Waugh RE
6. Wojtovich AP
7. Kim M
Optical Control of CD8+ T Cell Metabolism and Effector Functions.; Frontiers in immunology; Vol 12. 2021.
1. Reilly EC
2. Sportiello M
3. Emo KL
4. Amitrano AM
5. Jha R
6. Kumar ABR
7. Laniewski NG
8. Yang H
9. Kim M
10. Topham DJ
CD49a Identifies Polyfunctional Memory CD8 T Cell Subsets that Persist in the Lungs After Influenza Infection.; Frontiers in immunology; Vol 12. 2021.
1. Bares AJ
2. Mejooli MA
3. Pender MA
4. Leddon SA
5. Tilley S
6. Lin K
7. Dong J
8. Kim M
9. Fowell DJ
10. Nishimura N
11. Schaffer CB
Hyperspectral multiphoton microscopy for in vivo visualization of multiple, spectrally overlapped fluorescent labels.; Optica; Vol 7(11). 2020 Nov 20.
1. Mai N
2. Prifti V
3. Lim K
4. O'Reilly MA
5. Kim M
6. Halterman MW
Lung SOD3 limits neurovascular reperfusion injury and systemic immune activation following transient global cerebral ischemia.; Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association; Vol 29(9). 2020 Sep.
1. Lim K
2. Kim TH
3. Trzeciak A
4. Amitrano AM
5. Reilly EC
6. Prizant H
7. Fowell DJ
8. Topham DJ
9. Kim M
In situ neutrophil efferocytosis shapes T cell immunity to influenza infection.; Nature immunology. 2020 Aug 03.
1. Trzeciak A
2. Pietropaoli AP
3. Kim M
Biomarkers and Associated Immune Mechanisms for Early Detection and Therapeutic Management of Sepsis.; Immune network; Vol 20(3). 2020 Jun.
1. Mai N
2. Prifti V
3. Kim M
4. Halterman MW
Characterization of neutrophil-neuronal co-cultures to investigate mechanisms of post-ischemic immune-mediated neurotoxicity.; Journal of neuroscience methods. 2020 May 20.
1. Berry BJ
2. Trewin AJ
3. Milliken AS
4. Baldzizhar A
5. Amitrano AM
6. Lim Y
7. Kim M
8. Wojtovich AP
Optogenetic control of mitochondrial protonmotive force to impact cellular stress resistance.; EMBO reports. 2020 Feb 11.
1. Trzeciak A
2. Lerman YV
3. Kim TH
4. Kim MR
5. Mai N
6. Halterman MW
7. Kim M
Long-Term Microgliosis Driven by Acute Systemic Inflammation.; Journal of immunology (Baltimore, Md. : 1950). 2019 Oct 16.
1. Gaylo-Moynihan A
2. Prizant H
3. Popović M
4. Fernandes NRJ
5. Anderson CS
6. Chiou KK
7. Bell H
8. Schrock DC
9. Schumacher J
10. Capece T
11. Walling BL
12. Topham DJ
13. Miller J
14. Smrcka AV
15. Kim M
16. Hughson A
17. Fowell DJ
Programming of Distinct Chemokine-Dependent and -Independent Search Strategies for Th1 and Th2 Cells Optimizes Function at Inflamed Sites.; Immunity. 2019 Jul 31.
1. Mai N
2. Miller-Rhodes K
3. Prifti V
4. Kim M
5. O'Reilly MA
6. Halterman MW
Lung-Derived SOD3 Attenuates Neurovascular Injury After Transient Global Cerebral Ischemia.; Journal of the American Heart Association; Vol 8(9). 2019 May 07.
1. Hyun YM
2. Choe YH
3. Park SA
4. Kim M
LFA-1 (CD11a/CD18) and Mac-1 (CD11b/CD18) distinctly regulate neutrophil extravasation through hotspots I and II.; Experimental & molecular medicine; Vol 51(4). 2019 Apr 09.
1. Canales-Benavides A
2. Zhuo Y
3. Amitrano AM
4. Kim M
5. Hernandez-Aranda RI
6. Carney PS
7. Schnell M
Accessible quantitative phase imaging in confocal microscopy with sinusoidal-phase synthetic optical holography.; Applied optics; Vol 58(5). 2019 Feb 10.
1. Arandjelovic S
2. Perry JSA
3. Lucas CD
4. Penberthy KK
5. Kim TH
6. Zhou M
7. Rosen DA
8. Chuang TY
9. Bettina AM
10. Shankman LS
11. Cohen AH
12. Gaultier A
13. Conrads TP
14. Kim M
15. Elliott MR
16. Ravichandran KS
A noncanonical role for the engulfment gene ELMO1 in neutrophils that promotes inflammatory arthritis.; Nature immunology; Vol 20(2). 2019 Feb.