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Curriculum

All NGP students must complete core curriculum courses during their first year including: Cellular Neuroscience (NSC 512), Integrative and Systems Neuroscience (NSC 531), Ethics in Research (IND 501), Human Brain Anatomy (NSC 511)1, Introduction to Programming (NSC 410), and at least three laboratory rotations of their own choosing.

During years 1 and 2, NGP students must also complete two Fall semesters of Current Topics in Cellular Neuroscience (NSC 592), and two Spring semesters of Critical Reading In Integrative and Systems Neuroscience (NSC 592), Applied Statistics in the Biomedical Sciences (BST 467), serve as a teaching assistant for one semester (NSC 581 - in year 2 or 3), and register for NSC Student Seminar (NSC 503) each semester they are in the program.

At the end of the first year, students formally declare whether they will follow the Neuroscience (NSC) or Neurobiology & Anatomy (NBA) track. Regardless of track, students should strive to complete all coursework by the end of the fifth semester of study.

  • Neuroscience track – maximum flexibility to tailor advanced coursework to fit individual education and research objectives.
  • NBA track – comprehensive exposure to human physiology and anatomy or medical neuroscience through participation in the medical school curriculum.

In addition to the coursework listed above, students must complete a minimum of 10 elective credits of coursework2. All students are strongly encouraged to enroll in Introduction to Computational Neuroscience (NSC 547). The remaining elective credits are earned in upper-level graduate courses and are chosen in consultation with the NGP Director and/or the student’s thesis advisor.

1 NSC 511 is not a requirement for M.D/PhD students

2 MD/PhD students can use 10 credit hours of medical school coursework to fulfill the electives requirement


Sample Curriculum
1st year
Fall Semester - 16 credits
NSC 592 (1 credit)Current Topics in Cellular Neuroscience
NSC 503 (1 credit)NSC Student Seminar
IND 501 (1 credit)Ethics & Professional Integrity in Research
NSC 512 (5 credits)Cellular Neuroscience
NSC 590 (variable credits)Lab Rotations

Elective(s)*
Spring Semester - 16 credits
NSC 592 (1 credit)Critical Reading in Integrative and Systems NSC
NSC 503 (1 credit)NSC Student Seminar
NSC 511 (1 credit)Human Brain Anatomy
NSC 531 (6 credits)Integrative & Systems NSC
NSC 410 (1 credit)Introduction to Programming
NSC 590 (variable credits)Lab Rotations

Elective(s)*
2nd Year
Fall Semester NSC Track - 16 credits
NSC 592 (1 credit)Current Topics in Cellular Neuroscience
NSC 503 (1 credit)NSC Student Seminar
NSC 547 (3 credits)Introduction to Computational Neuroscience
NSC 595 (variable credits)PhD Research

Elective(s)*
Spring Semester NSC Track - 16 credits
NSC 592 (1 credit)Critical Reading in Integrative and Systems
NSC 503 (1 credit)NSC Student Seminar
3NSC 581 (3 credits)Teaching Tutorial
4BST 467 (4 credist)Appl. Stats in Biomed. Sci.
NSC 595 (variable credits)PhD Research

Elective(s)*
Fall Semester NBA Track - 16 credits
5ANA 526 (16 credits)Human Structure & Function
OR
NSC 503 (1 credit)NSC Student Seminar
NSC 592 (1 credit)Current Topics in Cellular Neuroscience
ANA 525 (8 credits)Mind, Brain and Behavior
ANA 595 (6 credits)PhD Research
Spring Semester NBA Track - 16 credits
NSC 503 (1 credit)NSC Student Seminar
3NSC 581 (3 credits)Teaching Tutorial
NSC 592 (1 credit)Critical Reading in Integrative and Systems NSC

3 Students may elect to fulfill the TA requirement (NSC 581) in the fall or spring of year 2 or 3.

4 BST 467 may be replaced with Intro to Biostatistics (BST 463) or Data Analysis I (BCS 510) - Fall semester

5 Students taking ANA 526 cannot register for any other courses that semester.

MD/PhD Program (MSTP students) usually enter the PhD portion of their combined degree work after the basic science years of the MD curriculum. During the second year of the MD program, they should discuss the PhD Program with prospective faculty advisors and the NGP director. It is optimal for the student to complete two research rotations before choosing a permanent advisor. A total of 96 credit hours is required for the PhD; MD/ PhD Program course requirements are meant to be sufficiently flexible to accommodate students with diverse backgrounds and career goals. MD/PhD students are allowed to waive the required Neuroscience Graduate Program electives.

  • NSC 511 is not required for MD/PhD students. Email the course instructor for approval to waive this requirement.
  • MD/PhD students are exempt from the TA requirement but may do so if they are interested.
  • MD/PhD students need to complete only one rotation report – instructions on page 8-10 of the handbook.
  • MD/PhD students can waive up to ten elective credits from medical school.
    • Typically, ANA 526 Human Structure & Function or ANA 525 Mind, Brain and Behavior

During the first year each student is assigned to a first-year advising committee comprised of two NGP faculty members and a senior NGP student. One of the faculty will be the current rotation mentor. The goal of the first-year advisory committee is to provide critical feedback to students early in their careers, before they choose a thesis lab. Since students may not have formed individual relationships with faculty and senior students at this point, the first-year advisory committee provides an opportunity to forge such relationships and get mentorship at a critical time when students may have less access to meaningful input. Mentors provide advice on areas that include (but are not limited to): expectations in graduate school, balancing classes and lab work, study habits, choosing a rotation and eventually a thesis lab, reading the scientific literature, scientific writing, qualifying exams, interacting with faculty and students, networking, and future career options. The first-year advising committee also provides feedback on rotation reports (see below) and oral presentations in student seminar. By the start of the second year, this committee is replaced by the Part I Exam Committee, Part II Exam Committee, and eventually by the Thesis Committee. Timing and guidelines for convening these committees are described later in the handbook.

The primary purpose of the lab rotation is to provide students with an insider’s view, through active participation in a research project, of the research interests, laboratory environment, and mentoring style of faculty they are considering as potential thesis advisors. Laboratory rotations also provide an opportunity to learn new techniques and to gain an appreciation for different scientific approaches to a problem. The experience should broaden one’s research skills and, therefore, students may want to avoid multiple rotations in labs utilizing essentially the same approaches and techniques. On the other hand, coordinating the rotations to employ different techniques aimed at investigations into one area of neuroscience research can be beneficial.

NGP students must complete at least 3 rotations with tenure track faculty by the end of the summer after their first year. The Senior Associate Dean for Graduate Education has established a standard set of start and end dates for lab rotations as follows:

Rotation Proposal DueRotation BeginsRotation EndsEvaluations Due
June 18July 1August 31September 15
September 15October 1December 15December 20
December 18January 1March 15April 1
March 1March 16May 31June 15

At the conclusion of each rotation, the student and rotation mentor each complete a Lab Rotation Evaluation. Rotation Evaluation forms are available from the NGP Administrator or online at: https://www.urmc.rochester.edu/education/graduate/home/forms.aspx

Incoming students can arrive early and begin their first rotation on July 1 before starting classes in the fall.

When selecting a lab rotation, students must check with the mentor to find out whether they will be working with radioisotopes, certain regulated chemicals, or biologicals, and/or animals or human subjects. In such cases, students will need to complete specific required trainings.

Rotation reports

NGP first year students are required to complete two written rotation reports (MSTP students will only be required to complete a fall rotation report). The goal of guided rotation reports is to provide students with the opportunity to practice their scientific writing skills early. These skills include the ability to formulate project goals and provide rationale and an overview of the field. Many students come in with limited scientific writing experience and struggle to develop these skills in graduate school. A critical aspect of the rotation reports is to provide students with consistent feedback throughout the first year to ensure that their skills improve and that they are provided with the support they require, depending on their level of competency.

It is important that both students and faculty realize that rotation experiences vary widely. Some students will design and complete a full experiment and be ready to present their findings in the form of a scientific paper. Others will take part in a team approach and experience different techniques without formally carrying out an experiment. Those students may write a rotation report that focuses on the bigger questions addressed by their rotation lab or the techniques that they have explored to address these questions. DATA ARE NOT REQUIRED but may be presented if available. The most important result of the rotation write-up is that students learn to communicate scientific concepts clearly and identify important aspects of a new scientific field.

To ensure that reports are completed in a timely manner, rotation reports will only be required for fall and winter rotations. Completion of the reports will be required to obtain a passing grade in NGP Student Seminar (NSC 503).

Students not doing rotations in either of those rotation periods can complete a report on a rotation completed earlier.

Report format

The main point of the report is to demonstrate an understanding of the scientific field explored during the rotation and to provide a description of the rotation experience. DATA ARE NOT REQUIRED, although students who have obtained data during their rotations are welcome to include them in their report.

The report must include a Title followed by at least four sections:

  1. Abstract: a brief paragraph succinctly describing the point of the rotation project or rotation experience.
  2. Introduction: an overview of the field and where the rotation project fits into the big picture view.
  3. Materials and Methods: description of the techniques used with their limitations. This section may include the design of experiments if this approach was part of the rotation whether the experiments yielded data.
  4. Discussion: describe any results or expected results if none were obtained and how they would inform the field and lead to future research directions.
  5. A results section may be included if appropriate.

A proposal will be required at the beginning of the rotation period. If the report describes a rotation that was completed prior to the timing of the report, then the proposal can be replaced with the purpose section.

The report is to be submitted as a Word document approximately 3-6 pages of text, double spaced, Arial font, 11 point, one-inch margins on all four sides of the page. Figures, Tables and References are NOT included in this page limit. Pages must be numbered.

Complete references are to be provided at the end of the report. There is no limit to the number of references; however, the student is expected to have read all the references cited. References should be cited in the text as “First author et al., 2005”, rather than numbered.

Additional pages can be used, as needed, for Figures, brief Figure Legends and Tables for data obtained during the rotation.

Timelines

Students are expected to turn in sections of the report on Mondays throughout the semester to their advisory committee and to rewrite those sections based on the feedback obtained. Timely submission of both the report sections and feedback from the faculty is critical. Faculty may ask for additional rewriting if necessary. Students are strongly encouraged to seek feedback from the rotation advisor before or along with submission to the first-year advisory committee.

Sample timeline (will vary depending on semester/academic year):
Rotation startAbstract due to the committee
+ 1 weekFeedback on abstract due back to student
+ 3 weekRewrite of abstract and adding introduction due to committee
+ 1 weekFeedback on abstract and introduction due back to student
+ 3 weekRewrite methods and discussion due to committee
+ 1 weekFeedback on all the above
+ 1 week
Final report due to committee
During years one and two, students must register for NSC 592. This course, which focuses on both historic and recent findings in the neuroscience literature, provides experience with reading scientific papers, experimental design, data analysis, and critical thinking. The readings are often coordinated with materials being taught in the core Cellular and Systems Neuroscience courses. In years three and beyond, students are free to participate in a journal club related to their research area. If a journal club in a student’s area of interest does not exist, students are encouraged to form one.
Students are required to register for NSC 503/ ANA 522 NSC Student Seminar every semester. This course provides a forum where students deliver, at least once per year, an oral presentation related to their research. Both students and faculty members will complete a short evaluation form for each talk, helping the presenter identify their strengths and areas for improvement. Students must attend a minimum of 80% of the presentations each semester to receive a passing grade. Required attendance includes named lectures such as the Notter and Doty and Neuroscience Retreat. Students who miss seminar due to illness or attending a scientific conference will be excused. Unexcused absences beyond 80% will be made up by completing a written assignment after consultation with the course directors.

All NGP students will be required to serve as a teaching assistant (TA) for at least one semester6. This experience typically includes responsibility for a weekly classes, discussion group, or laboratory in the undergraduate courses Basic Neurobiology (NSC 201, Fall semester) or Lab in Neurobiology (NSC 203, Spring semester), or the medical school courses Mind, Brain and Behavior or Human Structure and Function (ANA 525). Students fulfill the TA requirement by registering for 3 credits of Teaching Tutorial, either NSC 581 (for teaching in NSC 201/203 or an equivalent graduate or undergraduate course), ANA 581 (for teaching in HSF), or ANA 583 (for teaching in MBB). The TA requirement is usually fulfilled in the spring of the 2nd year or fall of the 3rd year. Note that PRIOR APPROVAL from the course director is required before registering.

6 M.D./Ph.D. students are exempt from the TA requirement but may do so if interested.

By July 1 following the first year of study, students declare which PhD degree they will pursue, Neuroscience or Neurobiology & Anatomy, and to identify whose lab they will join. If a student seeks a fourth rotation in the summer after their first year, an extension to August 1st may be warranted to ensure time to complete rotation and choose a lab. It is strongly recommended that students seek advice from the NGP Director or Associate Director and their research advisor prior to making the choice of PhD track, keeping in mind the eligibility of faculty in each track, course requirements, teaching requirements, etc. A form available from the NGP Administrator is to be completed and returned indicating the student’s choice. At that time, the NGP Administrator will schedule a brief meeting between the student, his/her thesis advisor and the NGP Director to go over student and mentor guidelines and expectations as well as remaining degree requirements.

6 M.D./Ph.D. students are exempt from the TA requirement but may do so if interested.