URochester Medicine / Labs / Haber Lab / Publications

Recent Publications

1. Maffei C
2. Gong T
3. Neudorfer C
4. Sung D
5. Mihir D
6. Gunalan K
7. Ghosh S
8. Augustinack JC
9. Huang SY
10. Richardson RM
11. Haber SN
12. Yendiki A
A human subcortical connectome at 400 μm resolution.; bioRxiv : the preprint server for biology. 2026 Apr 03.
1. Gong T
2. Maffei C
3. Sung D
4. Bell E
5. Wu J
6. Shao J
7. Rosenblum EW
8. Zeng X
9. Ramos-Llorden G
10. Müller A
11. Mahmutovic M
12. Keil B
13. Gunalan K
14. Ghosh S
15. Augustinack JC
16. Huang SY
17. Haber SN
18. Yendiki A
Multi-dimensional diffusion MRI at ultra-high gradient strength for mapping axonal architecture and microstructure in the primate brain.; bioRxiv : the preprint server for biology. 2026 Feb 18.
1. Lima Santos JP
2. Versace A
3. Arora M
4. Bertocci MA
5. Chase HW
6. Graur S
7. Bonar L
8. Maffei C
9. Yendiki A
10. Boisseau CL
11. Haber SN
12. Rasmussen SA
13. Phillips ML
Medial prefrontal-thalamic white matter microstructure is associated with harm avoidance in OCD: a discovery and transdiagnostic replication study.; Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 2026 Jan 31.
1. Maffei C
2. Celestine MR
3. Gong T
4. Jones R
5. Dann E
6. Lehman J
7. Augustinack J
8. Wang H
9. Haber SN
10. Yendiki A
The modular nature of long-association pathways in the human brain.; bioRxiv : the preprint server for biology. 2026 Jan 08.
1. Descoteaux M
2. Schilling KG
3. Aydogan DB
4. Beaulieu C
5. Borra E
6. Chamberland M
7. Daducci A
8. Luca A
9. Dell'Acqua F
10. Dubois J
11. Dyrby TB
12. Farquharson S
13. Forkel S
14. Froeling M
15. Griffa A
16. Grotheer M
17. Guevara P
18. Haber SN
19. Jangir VK
20. Leemans A
21. Lefebvre J
22. Lin CP
23. Little G
24. Lo CZ
25. Maffei C
26. Mayberg HS
27. McNab JA
28. Mukherjee P
29. O'Donnell LJ
30. Parent M
31. Pierpaoli C
32. Rheault F
33. Rockland KS
34. Roebroeck A
35. Rokem A
36. Rushmore RJ
37. Sarubbo S
38. Schiavi S
39. Sotiropoulos SN
40. Szczupak D
41. de Schotten MT
42. Tournier JD
43. Vergani F
44. Yang JY
45. Zhang F
46. Jones D
47. Petit L
Millennium Pathways for Tractography: 40 grand challenges to shape the future of tractography.; ArXiv. 2025 Sep 30.
1. Roebroeck A
2. Haber S
3. Borra E
4. Schiavi S
5. Forkel SJ
6. Rockland K
7. Dyrby TB
8. Schilling K
Animal models are useful in studying human neuroanatomy with tractography.; Brain structure & function; Vol 230(5), pp. 79. 2025 May 31.
1. Sotiropoulos SN
2. Thiebaut de Schotten M
3. Haber SN
4. Forkel SJ
Cross-species neuroanatomy in primates using tractography.; Brain structure & function; Vol 230(5), pp. 75. 2025 May 28.
1. Gong T
2. Maffei C
3. Dann E
4. Lee HH
5. Lee H
6. Augustinack JC
7. Huang SY
8. Haber SN
9. Yendiki A
Interplay between MRI-based axon diameter and myelination estimates in macaque and human brain.; Imaging neuroscience (Cambridge, Mass.); Vol 3. 2025 May 12.
1. Sundaresan V
2. Lehman JF
3. Maffei C
4. Haber SN
5. Yendiki A
Self-supervised segmentation and characterization of fiber bundles in anatomic tracing data.; Imaging neuroscience (Cambridge, Mass.); Vol 3. 2025 Mar 24.
1. Lima Santos JP
2. Versace A
3. Arora M
4. Bertocci MA
5. Chase HW
6. Skeba A
7. Graur S
8. Bonar L
9. Maffei C
10. Yendiki A
11. Rasmussen SA
12. Haber SN
13. Phillips ML
Examining relationships among NODDI indices of white matter structure in prefrontal cortical-thalamic-striatal circuitry and OCD symptomatology.; Translational psychiatry; Vol 14(1), pp. 410. 2024 Oct 02.
1. Peng X
2. Trambaiolli LR
3. Choi EY
4. Lehman JF
5. Linn G
6. Russ BE
7. Schroeder CE
8. Haber SN
9. Liu H
Cross-species striatal hubs: linking anatomy to resting-state connectivity.; NeuroImage. 2024 Sep 23.
1. Trambaiolli L
2. Maffei C
3. Dann E
4. Biazoli C
5. Bezgin G
6. Yendiki A
7. Haber S
Translation of monosynaptic circuits underlying amygdala fMRI neurofeedback training.; Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 2024 Aug 05.
1. Gong T
2. Maffei C
3. Dann E
4. Lee HH
5. Lee H
6. Augustinack JC
7. Huang SY
8. Haber SN
9. Yendiki A
Interplay between MRI-based axon diameter and myelination estimates in macaque and human brain.; ArXiv. 2024 Jul 02.
1. Saluja S
2. Qiu L
3. Wang AR
4. Campos G
5. Selheimer R
6. McNab JA
7. Haber SN
8. Barbosa DAN
9. Halpern CH
Diffusion MRI tractography guides investigation of the zona incerta: a novel target for deep brain stimulation.; Biological psychiatry. 2024 Feb 22.
1. Ghane M
2. Trambaiolli L
3. Bertocci MA
4. Martinez-Rivera FJ
5. Chase HW
6. Brady T
7. Skeba A
8. Graur S
9. Bonar L
10. Iyengar S
11. Quirk GJ
12. Rasmussen SA
13. Haber SN
14. Phillips ML
Specific patterns of endogenous functional connectivity are associated with harm avoidance in OCD.; Biological psychiatry. 2024 Feb 07.
1. Phan BN
2. Ray MH
3. Xue X
4. Fu C
5. Fenster RJ
6. Kohut SJ
7. Bergman J
8. Haber SN
9. McCullough KM
10. Fish MK
11. Glausier JR
12. Su Q
13. Tipton AE
14. Lewis DA
15. Freyberg Z
16. Tseng GC
17. Russek SJ
18. Alekseyev Y
19. Ressler KJ
20. Seney ML
21. Pfenning AR
22. Logan RW
Single nuclei transcriptomics in human and non-human primate striatum in opioid use disorder.; Nature communications; Vol 15(1), pp. 878. 2024 Jan 31.
1. Haber SN
2. Lehman J
3. Maffei C
4. Yendiki A
The Rostral Zona Incerta: A Subcortical Integrative Hub and Potential Deep Brain Stimulation Target for Obsessive-Compulsive Disorder.; Biological psychiatry. 2023 Jan 18.
1. Sundaresan V
2. Lehman JF
3. Maffei C
4. Haber SN
5. Yendiki A
Self-supervised segmentation and characterization of fiber bundles in anatomic tracing data.; bioRxiv : the preprint server for biology. 2023 Jan 02.
1. Maffei C
2. Girard G
3. Schilling KG
4. Aydogan DB
5. Adluru N
6. Zhylka A
7. Wu Y
8. Mancini M
9. Hamamci A
10. Sarica A
11. Teillac A
12. Baete SH
13. Karimi D
14. Yeh FC
15. Yildiz ME
16. Gholipour A
17. Bihan-Poudec Y
18. Hiba B
19. Quattrone A
20. Quattrone A
21. Boshkovski T
22. Stikov N
23. Yap PT
24. de Luca A
25. Pluim J
26. Leemans A
27. Prabhakaran V
28. Bendlin BB
29. Alexander AL
30. Landman BA
31. Canales-Rodríguez EJ
32. Barakovic M
33. Rafael-Patino J
34. Yu T
35. Rensonnet G
36. Schiavi S
37. Daducci A
38. Pizzolato M
39. Fischi-Gomez E
40. Thiran JP
41. Dai G
42. Grisot G
43. Lazovski N
44. Puch S
45. Ramos M
46. Rodrigues P
47. Prčkovska V
48. Jones R
49. Lehman J
50. Haber SN
51. Yendiki A
Insights from the IronTract challenge: Optimal methods for mapping brain pathways from multi-shell diffusion MRI.; NeuroImage; Vol 257. 2022 May 26.
1. Trambaiolli LR
2. Peng X
3. Lehman JF
4. Linn G
5. Russ BE
6. Schroeder CE
7. Liu H
8. Haber SN
Anatomical and functional connectivity support the existence of a salience network node within the caudal ventrolateral prefrontal cortex.; eLife; Vol 11. 2022 May 05.
1. Haber SN
2. Ford JM
Society of Biological Psychiatry's 2022 Meeting: Hybrid and Happy!; Biological psychiatry; Vol 91(9S). 2022 May 01.
1. Yendiki A
2. Aggarwal M
3. Axer M
4. Howard AFD
5. van Walsum AVC
6. Haber SN
Post mortem mapping of connectional anatomy for the validation of diffusion MRI.; NeuroImage. 2022 Mar 25.
1. Martínez-Rivera FJ
2. Pérez-Torres J
3. Velázquez-Díaz CD
4. Sánchez-Navarro MJ
5. Huertas-Pérez CI
6. Diehl MM
7. Phillips ML
8. Haber SN
9. Quirk GJ
A Novel Insular/Orbital-Prelimbic Circuit That Prevents Persistent Avoidance in a Rodent Model of Compulsive Behavior.; Biological psychiatry. 2022 Feb 19.
1. Monosov IE
2. Ogasawara T
3. Haber SN
4. Heimel JA
5. Ahmadlou M
The zona incerta in control of novelty seeking and investigation across species.; Current opinion in neurobiology; Vol 77, pp. 102650. 2022 Jan 15.
1. Maffei C
2. Lee C
3. Planich M
4. Ramprasad M
5. Ravi N
6. Trainor D
7. Urban Z
8. Kim M
9. Jones RJ
10. Henin A
11. Hofmann SG
12. Pizzagalli DA
13. Auerbach RP
14. Gabrieli JDE
15. Whitfield-Gabrieli S
16. Greve DN
17. Haber SN
18. Yendiki A
Using diffusion MRI data acquired with ultra-high gradient strength to improve tractography in routine-quality data.; NeuroImage; Vol 245. 2021 Nov 12.
Toward next-generation primate neuroscience: A collaboration-based strategic plan for integrative neuroimaging.; Neuron. 2021 Nov 02.
1. Haber SN
2. Liu H
3. Seidlitz J
4. Bullmore E
Prefrontal connectomics: from anatomy to human imaging.; Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 2021 Sep 28.
1. Haber SN
2. Robbins T
The prefrontal cortex.; Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 2021 Sep 23.
1. Baldermann JC
2. Schüller T
3. Kohl S
4. Voon V
5. Li N
6. Hollunder B
7. Figee M
8. Haber SN
9. Sheth SA
10. Mosley PE
11. Huys D
12. Johnson KA
13. Butson C
14. Ackermans L
15. Bouwens van der Vlis T
16. Leentjens AFG
17. Barbe M
18. Visser-Vandewalle V
19. Kuhn J
20. Horn A
Connectomic Deep Brain Stimulation for Obsessive-Compulsive Disorder.; Biological psychiatry. 2021 Jul 19.
1. Grisot G
2. Haber SN
3. Yendiki A
Diffusion MRI and anatomic tracing in the same brain reveal common failure modes of tractography.; NeuroImage; Vol 239. 2021 Jun 22.
1. Jezzini A
2. Bromberg-Martin ES
3. Trambaiolli LR
4. Haber SN
5. Monosov IE
A prefrontal network integrates preferences for advance information about uncertain rewards and punishments.; Neuron. 2021 Jun 03.
1. Cottaar M
2. Bastiani M
3. Boddu N
4. Glasser MF
5. Haber S
6. van Essen DC
7. Sotiropoulos SN
8. Jbabdi S
Modelling white matter in gyral blades as a continuous vector field.; NeuroImage. 2020 Dec 29.
1. Monosov IE
2. Haber SN
3. Leuthardt EC
4. Jezzini A
Anterior Cingulate Cortex and the Control of Dynamic Behavior in Primates.; Current biology : CB; Vol 30(23). 2020 Dec 07.
1. Tang W
2. Choi EY
3. Heilbronner SR
4. Haber SN
Nonhuman primate meso-circuitry data: a translational tool to understand brain networks across species.; Brain structure & function. 2020 Oct 30.
1. Chase HW
2. Graur S
3. Versace A
4. Greenberg T
5. Bonar L
6. Hudak R
7. Quirk GJ
8. Greenberg BD
9. Rasmussen SA
10. Haber SN
11. Phillips ML
Neural mechanisms of persistent avoidance in OCD: A novel avoidance devaluation study.; NeuroImage. Clinical; Vol 28. 2020 Aug 28.
1. Haber SN
2. Yendiki A
3. Jbabdi S
Four Deep Brain Stimulation Targets for Obsessive-Compulsive Disorder: Are They Different?; Biological psychiatry. 2020 Jul 25.
1. Sha Z
2. Versace A
3. Edmiston EK
4. Fournier J
5. Graur S
6. Greenberg T
7. Santos JPL
8. Chase HW
9. Stiffler RS
10. Bonar L
11. Hudak R
12. Yendiki A
13. Greenberg BD
14. Rasmussen S
15. Liu H
16. Quirk G
17. Haber S
18. Phillips ML
Functional disruption in prefrontal-striatal network in obsessive-compulsive disorder.; Psychiatry research. Neuroimaging; Vol 300. 2020 Jun 30.
1. Sha Z
2. Edmiston EK
3. Versace A
4. Fournier JC
5. Graur S
6. Greenberg T
7. Lima Santos JP
8. Chase HW
9. Stiffler RS
10. Bonar L
11. Hudak R
12. Yendiki A
13. Greenberg BD
14. Rasmussen S
15. Liu H
16. Quirk G
17. Haber S
18. Phillips ML
Functional Disruption of Cerebello-thalamo-cortical Networks in Obsessive-Compulsive Disorder.; Biological psychiatry. Cognitive neuroscience and neuroimaging; Vol 5(4). 2020 Apr.
1. Philip NS
2. McLaughlin NC
3. Carpenter LL
4. Phillips ML
5. Liu H
6. Haber SN
7. Greenberg BD
Transient aphasia induced by intermittent theta burst stimulation.; Brain stimulation; Vol 13(4). 2020 Mar 25.
1. Sui Y
2. Tian Y
3. Ko WKD
4. Wang Z
5. Jia F
6. Horn A
7. De Ridder D
8. Choi KS
9. Bari AA
10. Wang S
11. Hamani C
12. Baker KB
13. Machado AG
14. Aziz TZ
15. Fonoff ET
16. Kühn AA
17. Bergman H
18. Sanger T
19. Liu H
20. Haber SN
21. Li L
Deep Brain Stimulation Initiative: Toward Innovative Technology, New Disease Indications, and Approaches to Current and Future Clinical Challenges in Neuromodulation Therapy.; Frontiers in neurology; Vol 11. 2020.
1. Korponay C
2. Choi EY
3. Haber SN
Corticostriatal Projections of Macaque Area 44.; Cerebral cortex communications; Vol 1(1). 2020.
1. White JK
2. Bromberg-Martin ES
3. Heilbronner SR
4. Zhang K
5. Pai J
6. Haber SN
7. Monosov IE
A neural network for information seeking.; Nature communications; Vol 10(1). 2019 Nov 14.
1. Haber SN
2. Tang W
3. Choi EY
4. Yendiki A
5. Liu H
6. Jbabdi S
7. Versace A
8. Phillips M
Circuits, Networks, and Neuropsychiatric Disease: Transitioning From Anatomy to Imaging.; Biological psychiatry. 2019 Nov 06.
1. Petersen MV
2. Mlakar J
3. Haber SN
4. Parent M
5. Smith Y
6. Strick PL
7. Griswold MA
8. McIntyre CC
Holographic Reconstruction of Axonal Pathways in the Human Brain.; Neuron. 2019 Oct 15.
1. Tang W
2. Jbabdi S
3. Zhu Z
4. Cottaar M
5. Grisot G
6. Lehman JF
7. Yendiki A
8. Haber SN
A connectional hub in the rostral anterior cingulate cortex links areas of emotion and cognitive control.; eLife; Vol 8. 2019 Jun 19.
1. Miguel EC
2. Lopes AC
3. McLaughlin NCR
4. Norén G
5. Gentil AF
6. Hamani C
7. Shavitt RG
8. Batistuzzo MC
9. Vattimo EFQ
10. Canteras M
11. De Salles A
12. Gorgulho A
13. Salvajoli JV
14. Fonoff ET
15. Paddick I
16. Hoexter MQ
17. Lindquist C
18. Haber SN
19. Greenberg BD
20. Sheth SA
Evolution of gamma knife capsulotomy for intractable obsessive-compulsive disorder.; Molecular psychiatry; Vol 24(2). 2019 Feb.
1. Brennan BP
2. Wang D
3. Li M
4. Perriello C
5. Ren J
6. Elias JA
7. Van Kirk NP
8. Krompinger JW
9. Pope HG
10. Haber SN
11. Rauch SL
12. Baker JT
13. Liu H
Use of an Individual-Level Approach to Identify Cortical Connectivity Biomarkers in Obsessive-Compulsive Disorder.; Biological psychiatry. Cognitive neuroscience and neuroimaging; Vol 4(1). 2019 Jan.
1. Heilbronner SR
2. Meyer MAA
3. Choi EY
4. Haber SN
How do cortico-striatal projections impact on downstream pallidal circuitry?; Brain structure & function. 2018 Apr 13.
1. Huang AS
2. Mitchell JA
3. Haber SN
4. Alia-Klein N
5. Goldstein RZ
The thalamus in drug addiction: from rodents to humans.; Philosophical transactions of the Royal Society of London. Series B, Biological sciences; Vol 373(1742). 2018 Mar 19.
1. Safadi Z
2. Grisot G
3. Jbabdi S
4. Behrens TE
5. Heilbronner SR
6. McLaughlin NCR
7. Mandeville J
8. Versace A
9. Phillips ML
10. Lehman JF
11. Yendiki A
12. Haber SN
Functional Segmentation of the Anterior Limb of the Internal Capsule: Linking White Matter Abnormalities to Specific Connections.; The Journal of neuroscience : the official journal of the Society for Neuroscience; Vol 38(8). 2018 Feb 21.