URMC / Labs / McMurray Lab / Publications

Recent Publications

1. Sherina V
2. McMurray HR
3. Powers W
4. Land H
5. Love TMT
6. McCall MN
Correction: Multiple imputation and direct estimation for qPCR data with non-detects.; BMC bioinformatics; Vol 25(1), pp. 63. 2024 Feb 07.
1. McMurray HR
2. Stern HA
3. Ambeskovic A
4. Land H
5. McCall MN
Protocol to use TopNet for gene regulatory network modeling using gene expression data from perturbation experiments.; STAR protocols; Vol 3(4), pp. 101737. 2022 Sep 30.
1. McMurray HR
2. Ambeskovic A
3. Newman LA
4. Aldersley J
5. Balakrishnan V
6. Smith B
7. Stern HA
8. Land H
9. McCall MN
Gene network modeling via TopNet reveals functional dependencies between diverse tumor-critical mediator genes.; Cell reports; Vol 37(12). 2021 Dec 21.
1. Sherina V
2. McMurray HR
3. Powers W
4. Land H
5. Love TMT
6. McCall MN
Multiple imputation and direct estimation for qPCR data with non-detects.; BMC bioinformatics; Vol 21(1). 2020 Nov 26.
1. Azadniv M
2. Myers JR
3. McMurray HR
4. Guo N
5. Rock P
6. Coppage ML
7. Ashton J
8. Becker MW
9. Calvi LM
10. Liesveld JL
Bone marrow mesenchymal stromal cells from acute myelogenous leukemia patients demonstrate adipogenic differentiation propensity with implications for leukemia cell support.; Leukemia. 2019 Sep 06.
1. Wong EL
2. Lutz NM
3. Hogan VA
4. Lamantia CE
5. McMurray HR
6. Myers JR
7. Ashton JM
8. Majewska AK
Developmental alcohol exposure impairs synaptic plasticity without overtly altering microglial function in mouse visual cortex.; Brain, behavior, and immunity. 2017 Sep 13.
1. McCall MN
2. McMurray HR
3. Land H
4. Almudevar A
On non-detects in qPCR data.; Bioinformatics (Oxford, England); Vol 30(16). 2014 Aug 15.
1. Sampson ER
2. McMurray HR
3. Hassane DC
4. Newman L
5. Salzman P
6. Jordan CT
7. Land H
Gene signature critical to cancer phenotype as a paradigm for anticancer drug discovery.; Oncogene; Vol 32(33). 2013 Aug 15.
1. Tran V
2. McCall MN
3. McMurray HR
4. Almudevar A
On the underlying assumptions of threshold Boolean networks as a model for genetic regulatory network behavior.; Frontiers in genetics; Vol 4. 2013.
1. Ashton JM
2. Balys M
3. Neering SJ
4. Hassane DC
5. Cowley G
6. Root DE
7. Miller PG
8. Ebert BL
9. McMurray HR
10. Land H
11. Jordan CT
Gene sets identified with oncogene cooperativity analysis regulate in vivo growth and survival of leukemia stem cells.; Cell stem cell; Vol 11(3). 2012 Sep 7.
1. Almudevar A
2. McCall MN
3. McMurray HR
4. Land H
Fitting Boolean networks from steady state perturbation data; Statistical Applications in Genetics and Molecular Biology; Vol 10(1). 2011 Jan 01.
1. McMurray HR
2. Sampson ER
3. Compitello G
4. Kinsey C
5. Newman L
6. Smith B
7. Chen SR
8. Klebanov L
9. Salzman P
10. Yakovlev A
11. Land H
Synergistic response to oncogenic mutations defines gene class critical to cancer phenotype.; Nature; Vol 453(7198). 2008 Jun 19.
1. McMurray HR
2. McCance DJ
Degradation of p53, not telomerase activation, by E6 is required for bypass of crisis and immortalization by human papillomavirus type 16 E6/E7.; Journal of virology; Vol 78(11). 2004 Jun.
1. McMurray HR
2. McCance DJ
Human papillomavirus type 16 E6 activates TERT gene transcription through induction of c-Myc and release of USF-mediated repression.; Journal of virology; Vol 77(18). 2003 Sep.
1. McMurray HR
2. Nguyen D
3. Westbrook TF
4. McAnce DJ
Biology of human papillomaviruses.; International journal of experimental pathology; Vol 82(1). 2001 Feb.