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Yi-Fen Lee Lab

Welcome to the Lee Lab

My lab is studying extracellular vesicles (EVs), often called exosomes, for their roles in cancer development, progression and response to treatment, with a focus on Urology cancers such as bladder and prostate cancers.

This is a relatively new and exciting area of research: small vesicles, in size ranging from 30-250 nm, are secreted by almost all types of cells and contain bio-information (such as DNA, RNA and proteins) resembling the cells of origins. They travel distances via circulation, and can be taken up by recipient cells, consequently affecting their behavior. The genetic and molecular contents of EVs can become an attractive resource of biomarkers for prediction of disease and response to therapy.

In my lab, we have isolated EVs from cancer cell lines and urine and blood of patients with bladder cancer at different stages. Via miRNA array, gene array, and proteomics, we are aiming to identify the signature protein profiles that can be used for disease prognosis. Through the CRISPR/Cas9 gene editing system, we have attempted to inhibit cancer growth by targeting EV biogenesis pathways in cancer cells.

We are also studying potential involvement of EV secretion in response to two treatments that often apply in bladder cancer: BCG immunotherapy for superficial bladder cancer, and cisplatin chemotherapy for muscle invasive bladder cancer. Since the EVs are quite small - the size of a virus - we utilize the Nanosight nanoparticle tracking system, which allow us to trace and monitor EVs based on the Brownian motion of each single particle in a real time manner. In collaborations with URMC investigators, in addition to our participation in the SWOG S1602 clinical trial, we’ve started to collect and analyze patients’ urine- and blood-borne EV profiles before, during, and after therapy. Our goal is to establish rapid body fluid biopsy assays that can be used as indicators of patients’ responsiveness to therapy. The molecular/genetic contents within EVs from each individual patient could provide an opportunity to develop precision, personalized medicine in the future.

Yi-Fen Lee, Ph.D.

Yi-Fen Lee, Ph.D.
Principal Investigator

Publications

    1. Meyers DJ
    2. Wilson IB
    3. Lee Y
    4. Cai S
    5. Miller SC
    6. Rahman M
    The Quality of Nursing Homes That Serve Patients With Human Immunodeficiency Virus.; Journal of the American Geriatrics Society. 2019 Aug 29.
    1. Goudarzvand S
    2. St Sauver J
    3. Mielke MM
    4. Takahashi PY
    5. Lee Y
    6. Sohn S
    Early temporal characteristics of elderly patient cognitive impairment in electronic health records.; BMC medical informatics and decision making; Vol 19(Suppl 4). 2019 Aug 08.
    1. Lee YJ
    2. Kamen C
    3. Margolies L
    4. Boehmer U
    Online health community experiences of sexual minority women with cancer.; Journal of the American Medical Informatics Association : JAMIA. 2019 Jul 30.
    1. Majumder S
    2. Taylor WR
    3. Yab TC
    4. Berger CK
    5. Dukek BA
    6. Cao X
    7. Foote PH
    8. Wu CW
    9. Mahoney DW
    10. Aslanian HR
    11. Fernández-Del Castillo C
    12. Doyle LA
    13. Farrell JJ
    14. Fisher WE
    15. Lee LS
    16. Lee YN
    17. Park W
    18. Rodrigues C
    19. Gould Rothberg BE
    20. Salem RR
    21. Simeone DM
    22. Urs S
    23. Van Buren G
    24. Smyrk TC
    25. Allawi HT
    26. Lidgard GP
    27. Raimondo M
    28. Chari ST
    29. Kendrick ML
    30. Kisiel JB
    31. Topazian MD
    32. Ahlquist DA
    Novel Methylated DNA Markers Discriminate Advanced Neoplasia in Pancreatic Cysts: Marker Discovery, Tissue Validation, and Cyst Fluid Testing.; The American journal of gastroenterology. 2019 Jul 15.
    1. Sirunyan AM
    2. Tumasyan A
    3. Adam W
    4. Ambrogi F
    5. Asilar E
    6. Bergauer T
    7. Brandstetter J
    8. Dragicevic M
    9. Erö J
    10. Escalante Del Valle A
    11. Flechl M
    12. Frühwirth R
    13. Ghete VM
    14. Hrubec J
    15. Jeitler M
    16. Krammer N
    17. Krätschmer I
    18. Liko D
    19. Madlener T
    20. Mikulec I
    21. Rad N
    22. Rohringer H
    23. Schieck J
    24. Schöfbeck R
    25. Spanring M
    26. Spitzbart D
    27. Taurok A
    28. Waltenberger W
    29. Wittmann J
    30. Wulz CE
    31. Zarucki M
    32. Chekhovsky V
    33. Mossolov V
    34. Suarez Gonzalez J
    35. De Wolf EA
    36. Di Croce D
    37. Janssen X
    38. Lauwers J
    39. Pieters M
    40. Van Haevermaet H
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    Studies of Beauty Suppression via Nonprompt D^{0} Mesons in Pb-Pb Collisions at sqrt[s_{NN}]=5.02  TeV.; Physical review letters; Vol 123(2). 2019 Jul 12.

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