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Genomics Research Center Hosts Workshop Series

Tuesday, April 26, 2022

Introduction to Single Cell RNAseq Analysis Workshop

The Genomics Research Center is hosting an informatics workshop series: Introduction to single cell RNAseq analysis. The series will have four sessions, and each session will be split into a 45 minute lecture followed by a hands-on computational workshop that builds on the information covered in the lecture. Please note that attendance to the lecture is a prerequisite for the hands-on workshop that day.

Update (4/22/22): In-person attendance is full. Only remote is currently available

Monday May 2, 2022

1:00 pm - 1:45 pm           Lecture: Experimental Design and Wet Lab Considerations for Designing a Successful scRNA-Seq Study

2:15 pm - 4:30 pm           Workshop: Introduction to R, Rstudio, and the Seurat package

 

Tuesday May 3, 2022

1:00 pm - 1:45 pm           Lecture: scRNAseq quality control and clustering methods of single cell RNAseq data in Seurat

2:15 pm - 4:30 pm           Workshop: QC methods and interpretation; basic cell clustering

 

Thursday May 5, 2022

1:00 pm - 1:45 pm           Lecture: Cell typing, cell markers, and differential expression in Seurat

2:15 pm - 4:30 pm           Workshop: Cell typing and delineating cell markers that define clusters

 

Friday May 6, 2022

1:00 pm - 1:45 pm           Special Topics Lecture: GRC team will address individual questions

2:15 pm - 4:30 pm           Special Topics Workshop: GRC team will demonstrate scRNAseq computational methods of interest to attendees

 

A pre-workshop connectivity session is scheduled for Tuesday April 26th 2:00 pm - 3:30 pm. A zoom link will be sent upon registration. If you do not have experience with R or Rstudio, here is a tutorial to get you started on the basics: https://swirlstats.com/students.html

 

Register here: https://redcap.urmc.rochester.edu/redcap/surveys/?s=XC79FEY9KK4PWW9Y