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NERLSCD Meeting Hosted by Tim Bushnell and John Ashton

Friday, August 26, 2022

The Northeast Regional Laboratory Staff & Core Directors meeting is coming to Rochester this fall and will be co-hosted by CART’s Timothy Bushnell, PhD and John Ashton, PhD.

The NERLSCD meeting has emerged as one of the best annual regional gatherings for core facility directors, managers, staff and administrators to network with colleagues, learn about biotechnology advances and applications, discuss the challenges faced in implementing shared research resources, and to share stories of success.

The event is open to anyone who would like to register and attend and takes place October 12-14.

Enjoy technical workshops, discussion forums, and a special event at the Rochester Museum & Science Center. Mingle with attendees representing academic core facilities spanning from North Carolina to Quebec.

Learn more and register here: https://nerlscd.abrf.org

Read More: NERLSCD Meeting Hosted by Tim Bushnell and John Ashton

Genomics Research Center Hosts Workshop Series

Tuesday, April 26, 2022

Introduction to Single Cell RNAseq Analysis Workshop

The Genomics Research Center is hosting an informatics workshop series: Introduction to single cell RNAseq analysis. The series will have four sessions, and each session will be split into a 45 minute lecture followed by a hands-on computational workshop that builds on the information covered in the lecture. Please note that attendance to the lecture is a prerequisite for the hands-on workshop that day.

Update (4/22/22): In-person attendance is full. Only remote is currently available

Monday May 2, 2022

1:00 pm - 1:45 pm           Lecture: Experimental Design and Wet Lab Considerations for Designing a Successful scRNA-Seq Study

2:15 pm - 4:30 pm           Workshop: Introduction to R, Rstudio, and the Seurat package

 

Tuesday May 3, 2022

1:00 pm - 1:45 pm           Lecture: scRNAseq quality control and clustering methods of single cell RNAseq data in Seurat

2:15 pm - 4:30 pm           Workshop: QC methods and interpretation; basic cell clustering

 

Thursday May 5, 2022

1:00 pm - 1:45 pm           Lecture: Cell typing, cell markers, and differential expression in Seurat

2:15 pm - 4:30 pm           Workshop: Cell typing and delineating cell markers that define clusters

 

Friday May 6, 2022

1:00 pm - 1:45 pm           Special Topics Lecture: GRC team will address individual questions

2:15 pm - 4:30 pm           Special Topics Workshop: GRC team will demonstrate scRNAseq computational methods of interest to attendees

 

A pre-workshop connectivity session is scheduled for Tuesday April 26th 2:00 pm - 3:30 pm. A zoom link will be sent upon registration. If you do not have experience with R or Rstudio, here is a tutorial to get you started on the basics: https://swirlstats.com/students.html

 

Register here: https://redcap.urmc.rochester.edu/redcap/surveys/?s=XC79FEY9KK4PWW9Y