Recent Publications

• 1. Wang J
  2. Kautz H
  CupQ: A New Clinical Literature Search Engine.; Proceedings of the 11th International Conference on Knowledge Discovery and Information Retrieval (KDIR 2019). 2019 Sep 17.
• 1. Palli R
  2. Palshikar MG
  3. Thakar J
  Executable pathway analysis using ensemble discrete-state modeling for large-scale data.; PLoS computational biology; Vol 15(9). 2019 Sep 03.
• 1. Hollenberg AM
  2. Bernstein DN
  3. Baldwin AL
  4. Beltejar MJ
  5. Rubery PT
  6. Mesfin A
  Trends and Characteristics of Spine Research from 2006 to 2015: A Review of Spine Articles in a High Impact General Orthopaedic Journal.; Spine. 2019 Aug 12.
• 1. Hirad AA
  2. Bazarian JJ
  3. Merchant-Borna K
  4. Garcea FE
  5. Heilbronner S
  6. Paul D
  7. Hintz EB
  8. van Wijngaarden E
  9. Schifitto G
  10. Wright DW
  11. Espinoza TR
  12. Mahon BZ
  A common neural signature of brain injury in concussion and subconcussion.; Science advances; Vol 5(8). 2019 Aug.
• 1. Gaylo-Moynihan A
  2. Prizant H
  3. Popović M
  4. Fernandes NRJ
  5. Anderson CS
  6. Chiou KK
  7. Bell H
  8. Schrock DC
  9. Schumacher J
  10. Capece T
  11. Walling BL
  12. Topham DJ
  13. Miller J
  14. Smrcka AV
  15. Kim M
  16. Hughson A
  17. Fowell DJ
  Programming of Distinct Chemokine-Dependent and -Independent Search Strategies for Th1 and Th2 Cells Optimizes Function at Inflamed Sites.; Immunity. 2019 Jul 31.
• 1. Sweeney AM
  2. Plá V
  3. Du T
  4. Liu G
  5. Sun Q
  6. Peng S
  7. Plog BA
  8. Kress BT
  9. Wang X
  10. Mestre H
  11. Nedergaard M
  In Vivo Imaging of Cerebrospinal Fluid Transport through the Intact Mouse Skull using Fluorescence Macroscopy.; Journal of visualized experiments : JoVE. 2019 Jul 29.
• 1. Frey SM
  2. Goldstein NPN
  3. Fagnano M
  4. Tajon RS
  5. Halterman JS
  Considering the control group: The influence of follow-up assessments on asthma symptoms.; Academic pediatrics. 2019 Jul 27.
• 1. Goldstein NP
  2. Zhang X
  3. Sollinger C
  4. Chaturvedi A
  5. Turri R
  6. Mehta R
  7. Metlay LA
  8. Katzman PJ
  Superior Vena Cava Syndrome and Hypoxic Ischemic Encephalopathy Secondary to a Massive, Right-Sided Immature Cervical Teratoma.; Pediatric and developmental pathology : the official journal of the Society for Pediatric Pathology and the Paediatric Pathology Society. 2019 Jul 23.
• 1. Wu EK
  2. Eliseeva S
  3. Rahimi H
  4. Schwarz EM
  5. Georas SN
  Restrictive lung disease in TNF-transgenic mice: correlation of pulmonary function testing and micro-CT imaging.; Experimental lung research. 2019 Jul 18.
• 1. Frey SM
  2. Jones MR
  3. Goldstein NPN
  4. Fagnano M
  5. Halterman JS
  Comparing inhaled medications reported by adolescents with persistent asthma and their caregivers.; The Journal of asthma : official journal of the Association for the Care of Asthma. 2019 Jul 02.
• 1. Yoo BK
  2. Schaffer SJ
  3. Humiston SG
  4. Rand CM
  5. Goldstein NPN
  6. Albertin CS
  7. Concannon C
  8. Szilagyi PG
  Cost effectiveness of school-located influenza vaccination programs for elementary and secondary school children.; BMC health services research; Vol 19(1). 2019 Jun 24.
• 1. Sharma KK
  2. Kelly EA
  3. Pfeifer CW
  4. Fudge JL
  Translating Fear Circuitry: Amygdala Projections to Subgenual and Perigenual Anterior Cingulate in the Macaque.; Cerebral cortex (New York, N.Y. : 1991). 2019 Jun 20.
• 1. Huang H
  2. Kong W
  3. Jean M
  4. Fiches G
  5. Zhou D
  6. Hayashi T
  7. Que J
  8. Santoso N
  9. Zhu J
  A CRISPR/Cas9 screen identifies the histone demethylase MINA53 as a novel HIV-1 latency-promoting gene (LPG).; Nucleic acids research. 2019 Jun 05.
• 1. Plog BA
  2. Lou N
  3. Pierre CA
  4. Cove A
  5. Kenney HM
  6. Hitomi E
  7. Kang H
  8. Iliff JJ
  9. Zeppenfeld DM
  10. Nedergaard M
  11. Vates GE
  When the air hits your brain: decreased arterial pulsatility after craniectomy leading to impaired glymphatic flow.; Journal of neurosurgery. 2019 May 17.
• 1. Mai N
  2. Miller-Rhodes K
  3. Prifti V
  4. Kim M
  5. O'Reilly MA
  6. Halterman MW
  Lung-Derived SOD3 Attenuates Neurovascular Injury After Transient Global Cerebral Ischemia.; Journal of the American Heart Association; Vol 8(9). 2019 May 07.
• 1. Leonard A
  2. Millar MW
  3. Slavin SA
  4. Bijli KM
  5. Dionisio Santos DA
  6. Dean DA
  7. Fazal F
  8. Rahman A
  Critical role of autophagy regulator Beclin1 in endothelial cell inflammation and barrier disruption.; Cellular signalling. 2019 May 01.
• 1. Frisch BJ
  2. Hoffman CM
  3. Latchney SE
  4. LaMere MW
  5. Myers J
  6. Ashton J
  7. Li AJ
  8. Saunders J
  9. Palis J
  10. Perkins AS
  11. McCabe A
  12. Smith JN
  13. McGrath KE
  14. Rivera-Escalera F
  15. McDavid A
  16. Liesveld JL
  17. Korshunov VA
  18. Elliott MR
  19. MacNamara KC
  20. Becker MW
  21. Calvi LM
  Aged marrow macrophages expand platelet-biased hematopoietic stem cells via Interleukin1B.; JCI insight; Vol 5. 2019 Apr 18.
• 1. Jean MJ
  2. Zhou D
  3. Fiches G
  4. Kong W
  5. Huang H
  6. Purmal A
  7. Gurova K
  8. Santoso NG
  9. Zhu J
  Curaxin CBL0137 has the potential to reverse HIV-1 latency.; Journal of medical virology. 2019 Apr 16.
• 1. Morris JA
  2. Kemp JP
  3. Youlten SE
  4. Laurent L
  5. Logan JG
  6. Chai RC
  7. Vulpescu NA
  8. Forgetta V
  9. Kleinman A
  10. Mohanty ST
  11. Sergio CM
  12. Quinn J
  13. Nguyen-Yamamoto L
  14. Luco AL
  15. Vijay J
  16. Simon MM
  17. Pramatarova A
  18. Medina-Gomez C
  19. Trajanoska K
  20. Ghirardello EJ
  21. Butterfield NC
  22. Curry KF
  23. Leitch VD
  24. Sparkes PC
  25. Adoum AT
  26. Mannan NS
  27. Komla-Ebri DSK
  28. Pollard AS
  29. Dewhurst HF
  30. Hassall TAD
  31. Beltejar MG
  32. Adams DJ
  33. Vaillancourt SM
  34. Kaptoge S
  35. Baldock P
  36. Cooper C
  37. Reeve J
  38. Ntzani EE
  39. Evangelou E
  40. Ohlsson C
  41. Karasik D
  42. Rivadeneira F
  43. Kiel DP
  44. Tobias JH
  45. Gregson CL
  46. Harvey NC
  47. Grundberg E
  48. Goltzman D
  49. Adams DJ
  50. Lelliott CJ
  51. Hinds DA
  52. Ackert-Bicknell CL
  53. Hsu YH
  54. Maurano MT
  55. Croucher PI
  56. Williams GR
  57. Bassett JHD
  58. Evans DM
  59. Richards JB
  Author Correction: An atlas of genetic influences on osteoporosis in humans and mice.; Nature genetics. 2019 Apr 15.
• 1. Bell DR
  2. Wu E
  3. Rudmann C
  4. Forney M
  5. Kaiser C
  6. Wood R
  7. Chakkalakal J
  8. Paris N
  9. Klose A
  10. Xiao GQ
  11. Rangel-Moreno J
  12. Garcia-Hernandez M
  13. Ritchlin C
  14. Schwarz E
  15. Rahimi H
  Selective sexual dimorphism in musculoskeletal-cardiopulmonary pathologies and mortality in the TNF-transgenic mouse model of rheumatoid arthritis.; Arthritis & rheumatology (Hoboken, N.J.). 2019 Apr 10.
• 1. Dionisio-Santos DA
  2. Olschowka JA
  3. O'Banion MK
  Exploiting microglial and peripheral immune cell crosstalk to treat Alzheimer's disease.; Journal of neuroinflammation; Vol 16(1). 2019 Apr 05.
• 1. Mai N
  2. Miller-Rhodes K
  3. Knowlden S
  4. Halterman MW
  The post-cardiac arrest syndrome: A case for lung-brain coupling and opportunities for neuroprotection.; Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism. 2019 Mar 13.
• 1. Siebert AL
  2. Doucette LA
  3. Simpson-Haidaris PJ
  4. Werren JH
  Parasitoid wasp venom elevates sorbitol and alters expression of metabolic genes in human kidney cells.; Toxicon : official journal of the International Society on Toxinology. 2019 Mar 01.
• 1. Wu EK
  2. Ambrosini RD
  3. Kottmann RM
  4. Ritchlin CT
  5. Schwarz EM
  6. Rahimi H
  Reinterpreting Evidence of Rheumatoid Arthritis-Associated Interstitial Lung Disease to Understand Etiology.; Current rheumatology reviews. 2019 Jan 15.
• 1. Chockanathan U
  2. DSouza AM
  3. Abidin AZ
  4. Schifitto G
  5. Wismüller A
  Automated diagnosis of HIV-associated neurocognitive disorders using large-scale Granger causality analysis of resting-state functional MRI.; Computers in biology and medicine; Vol 106. 2019 Jan 15.
• 1. Lerman I
  2. Ma X
  3. Seger C
  4. Maolake A
  5. Garcia-Hernandez ML
  6. Rangel-Moreno J
  7. Ackerman J
  8. Nastiuk KL
  9. Susiarjo M
  10. Hammes SR
  Epigenetic Suppression of SERPINB1 Promotes Inflammation-Mediated Prostate Cancer Progression.; Molecular cancer research : MCR. 2019 Jan 04.
• 1. Szilagyi PG
  2. Schaffer S
  3. Rand CM
  4. Goldstein NPN
  5. Younge M
  6. Mendoza M
  7. Albertin CS
  8. Concannon C
  9. Graupman E
  10. Hightower AD
  11. Yoo BK
  12. Humiston SG
  Text Message Reminders for Child Influenza Vaccination in the Setting of School-Located Influenza Vaccination: A Randomized Clinical Trial.; Clinical pediatrics. 2019 Jan 02.
• 1. Morris JA
  2. Kemp JP
  3. Youlten SE
  4. Laurent L
  5. Logan JG
  6. Chai RC
  7. Vulpescu NA
  8. Forgetta V
  9. Kleinman A
  10. Mohanty ST
  11. Sergio CM
  12. Quinn J
  13. Nguyen-Yamamoto L
  14. Luco AL
  15. Vijay J
  16. Simon MM
  17. Pramatarova A
  18. Medina-Gomez C
  19. Trajanoska K
  20. Ghirardello EJ
  21. Butterfield NC
  22. Curry KF
  23. Leitch VD
  24. Sparkes PC
  25. Adoum AT
  26. Mannan NS
  27. Komla-Ebri DSK
  28. Pollard AS
  29. Dewhurst HF
  30. Hassall TAD
  31. Beltejar MG
  32. Adams DJ
  33. Vaillancourt SM
  34. Kaptoge S
  35. Baldock P
  36. Cooper C
  37. Reeve J
  38. Ntzani EE
  39. Evangelou E
  40. Ohlsson C
  41. Karasik D
  42. Rivadeneira F
  43. Kiel DP
  44. Tobias JH
  45. Gregson CL
  46. Harvey NC
  47. Grundberg E
  48. Goltzman D
  49. Adams DJ
  50. Lelliott CJ
  51. Hinds DA
  52. Ackert-Bicknell CL
  53. Hsu YH
  54. Maurano MT
  55. Croucher PI
  56. Williams GR
  57. Bassett JHD
  58. Evans DM
  59. Richards JB
  An atlas of genetic influences on osteoporosis in humans and mice.; Nature genetics. 2018 Dec 31.
• 1. Mestre H
  2. Hablitz LM
  3. Xavier AL
  4. Feng W
  5. Zou W
  6. Pu T
  7. Monai H
  8. Murlidharan G
  9. Castellanos Rivera RM
  10. Simon MJ
  11. Pike MM
  12. Plá V
  13. Du T
  14. Kress BT
  15. Wang X
  16. Plog BA
  17. Thrane AS
  18. Lundgaard I
  19. Abe Y
  20. Yasui M
  21. Thomas JH
  22. Xiao M
  23. Hirase H
  24. Asokan A
  25. Iliff JJ
  26. Nedergaard M
  Aquaporin-4-dependent glymphatic solute transport in the rodent brain.; eLife; Vol 7. 2018 Dec 18.
• 1. Jean MJ
  2. Fiches G
  3. Hayashi T
  4. Zhu J
  Current Strategies for Elimination of HIV-1 Latent Reservoirs Using Chemical Compounds Targeting Host and Viral Factors.; AIDS research and human retroviruses. 2018 Oct 23.
• 1. Plog BA
  2. Mestre H
  3. Olveda GE
  4. Sweeney AM
  5. Kenney HM
  6. Cove A
  7. Dholakia KY
  8. Tithof J
  9. Nevins TD
  10. Lundgaard I
  11. Du T
  12. Kelley DH
  13. Nedergaard M
  Transcranial optical imaging reveals a pathway for optimizing the delivery of immunotherapeutics to the brain.; JCI insight; Vol 3(20). 2018 Oct 18.
• 1. Ayoub E
  2. Wilson MP
  3. McGrath KE
  4. Li AJ
  5. Frisch BJ
  6. Palis J
  7. Calvi LM
  8. Zhang Y
  9. Perkins AS
  EVI1 overexpression reprograms hematopoiesis via upregulation of Spi1 transcription.; Nature communications; Vol 9(1). 2018 Oct 12.
• 1. Hollenberg AM
  2. Bernstein DN
  3. Beltejar MJ
  4. Terry T
  5. Mesfin A
  Publication Rate of Podium Presentations from the Orthopaedic Research Society Annual Meeting.; Journal of orthopaedic research : official publication of the Orthopaedic Research Society. 2018 Sep 25.
• 1. Wang W
  2. Friedland SC
  3. Guo B
  4. O'Dell MR
  5. Alexander WB
  6. Whitney-Miller CL
  7. Agostini-Vulaj D
  8. Huber AR
  9. Myers JR
  10. Ashton JM
  11. Dunne RF
  12. Steiner LA
  13. Hezel AF
  ARID1A, a SWI/SNF subunit, is critical to acinar cell homeostasis and regeneration and is a barrier to transformation and epithelial-mesenchymal transition in the pancreas.; Gut. 2018 Sep 18.
• 1. Chapuy B
  2. Stewart C
  3. Dunford AJ
  4. Kim J
  5. Kamburov A
  6. Redd RA
  7. Lawrence MS
  8. Roemer MGM
  9. Li AJ
  10. Ziepert M
  11. Staiger AM
  12. Wala JA
  13. Ducar MD
  14. Leshchiner I
  15. Rheinbay E
  16. Taylor-Weiner A
  17. Coughlin CA
  18. Hess JM
  19. Pedamallu CS
  20. Livitz D
  21. Rosebrock D
  22. Rosenberg M
  23. Tracy AA
  24. Horn H
  25. van Hummelen P
  26. Feldman AL
  27. Link BK
  28. Novak AJ
  29. Cerhan JR
  30. Habermann TM
  31. Siebert R
  32. Rosenwald A
  33. Thorner AR
  34. Meyerson ML
  35. Golub TR
  36. Beroukhim R
  37. Wulf GG
  38. Ott G
  39. Rodig SJ
  40. Monti S
  41. Neuberg DS
  42. Loeffler M
  43. Pfreundschuh M
  44. Trümper L
  45. Getz G
  46. Shipp MA
  Author Correction: Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes.; Nature medicine. 2018 Jun 28.
• 1. Chapuy B
  2. Stewart C
  3. Dunford AJ
  4. Kim J
  5. Kamburov A
  6. Redd RA
  7. Lawrence MS
  8. Roemer MGM
  9. Li AJ
  10. Ziepert M
  11. Staiger AM
  12. Wala JA
  13. Ducar MD
  14. Leshchiner I
  15. Rheinbay E
  16. Taylor-Weiner A
  17. Coughlin CA
  18. Hess JM
  19. Pedamallu CS
  20. Livitz D
  21. Rosebrock D
  22. Rosenberg M
  23. Tracy AA
  24. Horn H
  25. van Hummelen P
  26. Feldman AL
  27. Link BK
  28. Novak AJ
  29. Cerhan JR
  30. Habermann TM
  31. Siebert R
  32. Rosenwald A
  33. Thorner AR
  34. Meyerson ML
  35. Golub TR
  36. Beroukhim R
  37. Wulf GG
  38. Ott G
  39. Rodig SJ
  40. Monti S
  41. Neuberg DS
  42. Loeffler M
  43. Pfreundschuh M
  44. Trümper L
  45. Getz G
  46. Shipp MA
  Publisher Correction: Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes.; Nature medicine. 2018 Jun 28.
• 1. Hill MA
  2. Alexander WB
  3. Guo B
  4. Kato Y
  5. Patra KC
  6. O'Dell MR
  7. McCall MN
  8. Whitney-Miller CL
  9. Bardeesy N
  10. Hezel AF
  Kras and Tp53 mutations cause cholangiocyte- and hepatocyte-derived cholangiocarcinoma.; Cancer research. 2018 Jun 05.
• 1. Nywening TM
  2. Belt BA
  3. Cullinan DR
  4. Panni RZ
  5. Han BJ
  6. Sanford DE
  7. Jacobs RC
  8. Ye J
  9. Patel AA
  10. Gillanders WE
  11. Fields RC
  12. DeNardo DG
  13. Hawkins WG
  14. Goedegebuure P
  15. Linehan DC
  Targeting both tumour-associated CXCR2+ neutrophils and CCR2+ macrophages disrupts myeloid recruitment and improves chemotherapeutic responses in pancreatic ductal adenocarcinoma.; Gut; Vol 67(6). 2018 Jun.
• 1. DSouza AM
  2. Abidin AZ
  3. Chockanathan U
  4. Schifitto G
  5. Wismüller A
  Mutual connectivity analysis of resting-state functional MRI data with local models.; NeuroImage. 2018 May 16.
• 1. Chapuy B
  2. Stewart C
  3. Dunford AJ
  4. Kim J
  5. Kamburov A
  6. Redd RA
  7. Lawrence MS
  8. Roemer MGM
  9. Li AJ
  10. Ziepert M
  11. Staiger AM
  12. Wala JA
  13. Ducar MD
  14. Leshchiner I
  15. Rheinbay E
  16. Taylor-Weiner A
  17. Coughlin CA
  18. Hess JM
  19. Pedamallu CS
  20. Livitz D
  21. Rosebrock D
  22. Rosenberg M
  23. Tracy AA
  24. Horn H
  25. van Hummelen P
  26. Feldman AL
  27. Link BK
  28. Novak AJ
  29. Cerhan JR
  30. Habermann TM
  31. Siebert R
  32. Rosenwald A
  33. Thorner AR
  34. Meyerson ML
  35. Golub TR
  36. Beroukhim R
  37. Wulf GG
  38. Ott G
  39. Rodig SJ
  40. Monti S
  41. Neuberg DS
  42. Loeffler M
  43. Pfreundschuh M
  44. Trümper L
  45. Getz G
  46. Shipp MA
  Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes.; Nature medicine. 2018 Apr 30.
• 1. Schmidt TM
  2. DeAndrea-Lazarus IA
  3. Kimmell KT
  4. Vates GE
  5. Haines SJ
  6. Pilcher WH
  For the further training of individuals in neurosurgery: a history of the William P. Van Wagenen Fellowship.; Journal of neurosurgery. 2018 Apr 27.
• 1. Szilagyi PG
  2. Schaffer S
  3. Rand CM
  4. Goldstein NPN
  5. Hightower AD
  6. Younge M
  7. Eagan A
  8. Blumkin A
  9. Albertin CS
  10. DiBitetto K
  11. Concannon C
  12. Vincelli P
  13. Yoo BK
  14. Humiston SG
  Impact of elementary school-located influenza vaccinations: A stepped wedge trial across a community.; Vaccine. 2018 Apr 17.
• 1. Allbee AW
  2. Rincon-Limas DE
  3. Biteau B
  Lmx1a is required for the development of the ovarian stem cell niche in Drosophila.; Development (Cambridge, England). 2018 Apr 03.
• 1. Rand CM
  2. Goldstein NPN
  Patterns of Primary Care Physician Visits for US Adolescents in 2014: Implications for Vaccination.; Academic pediatrics; Vol 18(2S). 2018 Mar.
• 1. Rand CM
  2. Tyrrell H
  3. Wallace-Brodeur R
  4. Goldstein NPN
  5. Darden PM
  6. Humiston SG
  7. Albertin CS
  8. Stratbucker W
  9. Schaffer SJ
  10. Davis W
  11. Szilagyi PG
  A Learning Collaborative Model to Improve Human Papillomavirus Vaccination Rates in Primary Care.; Academic pediatrics; Vol 18(2S). 2018 Mar.
• 1. Morris AE
  2. Norris SA
  3. Perlmutter JS
  4. Mink JW
  Quantitative, clinically relevant acoustic measurements of focal embouchure dystonia.; Movement disorders : official journal of the Movement Disorder Society. 2018 Feb 20.
• 1. Piper K
  2. DeAndrea-Lazarus I
  3. Algattas H
  4. Kimmell KT
  5. Towner J
  6. Li YM
  7. Walter K
  8. Vates GE
  Risk Factors Associated with Readmission and Reoperation in Patients Undergoing Spine Surgery.; World neurosurgery; Vol 110. 2018 Feb.
• 1. Algattas H
  2. Damania D
  3. DeAndrea-Lazarus I
  4. Kimmell KT
  5. Marko NF
  6. Walter KA
  7. Vates GE
  8. Jahromi BS
  Systematic Review of Safety and Cost-Effectiveness of Venous Thromboembolism Prophylaxis Strategies in Patients Undergoing Craniotomy for Brain Tumor.; Neurosurgery; Vol 82(2). 2018 Feb 01.
• 1. Chockanathan U
  2. DSouza AM
  3. Abidin AZ
  4. Schifitto G
  5. Wismüller A
  Identification and functional characterization of HIV-associated neurocognitive disorders with large-scale Granger causality analysis on resting-state functional MRI.; Proceedings of SPIE--the International Society for Optical Engineering; Vol 10575. 2018 Feb.
• 1. Whitelaw BS
  Microglia-mediated synaptic elimination in neuronal development and disease.; Journal of neurophysiology; Vol 119(1). 2018 Jan 01.